32158 NOC3
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
32158 chr_2 NOC3 1084040 1086220 - NOC3

Synonyms

NCBI ID Ensembl Genomes exon ID
7450362 Thaps32158.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0230

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0141
 0.18

Most Highly Correlated Transcripts

261145

Lactamase_B superfamily
0.9538

25120

U3_assoc_6 superfamily
0.9392

31047

Brix
0.9375

bd96

(bd96) eIF-3_zeta
0.9359

23336

SRP40_C superfamily
0.9347

29705

18S_RNA_Rcl1p
0.9337

262018

hypothetical protein
0.929

22441

hypothetical protein
0.9272

23354

RNA-binding protein of the pumilio family
0.9272

22985

WD40 superfamily
0.9269

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CBF superfamily CBF/Mak21 family; CBF/Mak21 family. - 99.2268 6.48E-24 537 - 644 superfamily 252241
CBF superfamily CBF/Mak21 family; CBF/Mak21 family. - 99.2268 6.48E-24 537 - 644 superfamily 252241
NOC3p superfamily Nucleolar complex-associated protein; Nucleolar complex-associated protein (Noc3p) is conserved in... - 68.4335 8.20E-14 59 - 189 superfamily 254273
NOC3 Protein involved in the nuclear export of pre-ribosomes [Translation, ribosomal structure and... - 198.323 1.80E-54 146 - 650 multi-dom 227447

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_43447 PHATRDRAFT_43447 248275 223731 194260 Not available AT1G79150.1 480607

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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