32503 LETM1 superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
32503	chr_2	LETM1 superfamily	2357189	2360181	-	LETM1 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450464	Thaps32503.3, Thaps32503.1, Thaps32503.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0148

Most Highly Correlated Transcripts

9569 hypothetical protein 0.9071	33625 (top3a) TopA 0.9038	27048 TM_PBP1_branched-chain-AA_like superfamily 0.9033	2587 O-FucT_like 0.9028	37336 Beach 0.9016	7996 hypothetical protein 0.8973
263655 NAD_binding_8 superfamily 0.8931	8003 PIG-L 0.8925	261357 NAD_binding_8 superfamily 0.8918	270222 0.8908

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
LETM1 superfamily		LETM1-like protein; Members of this family are inner mitochondrial membrane proteins which play a...	-	303.839	1.82E-95	217 - 485	superfamily	254415

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_3241	PHATRDRAFT_3241	151094	322161	466558	Cre15.g639150.t1.1	AT3G59820.1	553568

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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