37336 Beach
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
37336 chr_14 Beach 726791 731140 - Beach

Synonyms

NCBI ID Ensembl Genomes exon ID
7452724 Thaps37336.1, Thaps37336.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0177

Most Highly Correlated Transcripts

37362

MCM
0.9266

264276

Vps8 superfamily
0.9188

2587

O-FucT_like
0.9163

261058

UDP-g_GGTase superfamily
0.9123

261056

(APB3) Adaptin_N
0.9071

33287

(UBA2) Ube1
0.9069

14527

Sugar_tr
0.9039

32503

LETM1 superfamily
0.9016

23130

NT_PAP_TUTase
0.9012

261357

NAD_binding_8 superfamily
0.9003

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Beach BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a... cl10511 447.46 8.97E-146 768 - 1052 specific 100117
Beach superfamily BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a... - 447.46 8.97E-146 768 - 1052 superfamily 263990
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 75.8344 6.71E-15 1170 - 1349 superfamily 238121

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_13399 PHATR_13399 159082 150820 451159 Not available AT4G02660.1 518726

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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