32795 Arl2
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
32795 chr_3 Arl2 818779 819319 - Arl2

Synonyms

NCBI ID Ensembl Genomes exon ID
7444751 Thaps32795.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0428

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0007
 0.40

Most Highly Correlated Transcripts

bd446

(bd446) HrpA
0.9232

268443

SAICAR_synt_Sc
0.8844

6028

NA
0.8775

bd392

(bd392) DEXDc
0.8764

264556

FBPase
0.8655

40200

TRX_reduct
0.8631

bd687

(bd687) NA
0.8611

24451

TFIIS_I superfamily
0.861

bd1949

(bd1949) NA
0.8576

21464

BTB
0.8523

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Arl2 Arf-like 2 (Arl2) GTPase; Arl2 (Arf-like 2) GTPases are members of the Arf family that bind GDP and... cl17170 288.84 3.89E-100 1 - 170 specific 206720
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 288.84 3.89E-100 1 - 170 superfamily 266525
COG1100 GTPase SAR1 and related small G proteins [General function prediction only] - 90.4051 1.78E-22 5 - 124 multi-dom 224025

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_51819 PHATRDRAFT_51819 193206 214939 362631 Cre01.g005550.t1.2 AT2G18390.1 313188

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005525 GO:0007264 GO:0006886 GO:0003924 GO:0003925 -

GO:0005525

GTP binding

Details: 
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO Category: 
MF

GO:0007264

small GTPase mediated signal transduction

Details: 
Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.
GO Category: 
BP

GO:0006886

intracellular protein transport

Details: 
The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO Category: 
BP

GO:0003924

GTPase activity

Details: 
Catalysis of the reaction: GTP + H2O = GDP + phosphate.
GO Category: 
MF

GO:0003925

NA

Details: 
NA
GO Category: 
NA

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