33094 SunThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
33094	chr_3	Sun	2198190	2199753	-	Sun

Synonyms

NCBI ID	Ensembl Genomes exon ID
7443796	Thaps33094.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0208

Most Highly Correlated Transcripts

261394 Aldo_ket_red 0.9163	34018 RPN7 0.9046	20846 LPLAT_MGAT-like 0.9042	1000 hypothetical protein 0.9035	16295 FBPase 0.9031	7444 hypothetical protein 0.9027
9880 SGNH_hydrolase superfamily 0.9025	10244 hypothetical protein 0.9	3354 hypothetical protein 0.8987	5038 DUF179 0.8969

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Sun		tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]	-	183.36	1.59E-52	254 - 520	multi-dom	223222

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_47176	PHATRDRAFT_47176	159041	318302	Not available	Cre13.g606200.t1.1	AT1G06560.1	499736

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0003723 -

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