20846 LPLAT_MGAT-likeThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
20846	chr_1	LPLAT_MGAT-like	1625749	1627179	+	LPLAT_MGAT-like

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445142	Thaps20846.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0208

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0123	0.31	0.14 1300

Most Highly Correlated Transcripts

3071 NA 0.9285	7597 2A0111 0.906	8599 hypothetical protein 0.9047	33094 Sun 0.9042	22097 hypothetical protein 0.9042	882 hypothetical protein 0.9002
1650 hypothetical protein 0.8987	10050 DUF2233 0.8983	37596 SpoT 0.8925	7444 hypothetical protein 0.8896

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
LPLAT_MGAT-like		Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like;...	cl17185	139.345	2.02E-38	217 - 444	specific	153249
LPLAT superfamily		Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis; Lysophospholipid...	-	139.345	2.02E-38	217 - 444	superfamily	266537

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_49462	PHATRDRAFT_49462	181385	181840	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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