33205 KefBThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
33205	chr_3	KefB	2196569	2198086	-	KefB

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452116	Thaps33205.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0015

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0185	0.25	0.001 2000

Most Highly Correlated Transcripts

bd1645 (bd1645) tpt 0.9762	bd1306 (bd1306) NA 0.9719	11822 hypothetical protein 0.9628	bd1160 (bd1160) Chloroa_b-bind superfamily 0.9541	bd1403 (bd1403) NA 0.9539	bd1820 (bd1820) Fasciclin 0.9468
bd208 (bd208) DUF3529 0.9439	263427 PLN02372 0.9406	bd1380 (bd1380) ycf39 0.9401	270348 hypothetical protein 0.9313

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
KefB		Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]	cl10482	182.825	4.15E-52	122 - 489	specific	223551
KefB superfamily		Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]	-	182.825	4.15E-52	122 - 489	superfamily	245312

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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