33653 GrpE
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
33653 chr_4 GrpE 1342071 1342860 - GrpE

Synonyms

NCBI ID Ensembl Genomes exon ID
7448806 Thaps33653.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0287

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0114
 0.48

Most Highly Correlated Transcripts

105

PTZ00248
0.9002

268062

PRK14293
0.8938

9247

hypothetical protein
0.8857

3416

TPR
0.8644

262630

dnaj-like protein
0.8607

9318

tsf
0.8594

269616

PLN03127
0.8591

268714

TypA_BipA
0.8576

39255

PLN02734
0.8555

268519

hypothetical protein
0.8553

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GrpE GrpE is the adenine nucleotide exchange factor of DnaK (Hsp70)-type ATPases. The GrpE dimer binds... cl03075 166.15 3.01E-51 114 - 258 specific 238252
GrpE superfamily GrpE is the adenine nucleotide exchange factor of DnaK (Hsp70)-type ATPases. The GrpE dimer binds... - 166.15 3.01E-51 114 - 258 superfamily 261574

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_15032 PHATRDRAFT_15032 161075 297446 431117 Cre08.g370450.t1.2 AT4G26780.1 311338

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000774 GO:0006457 GO:0042803 GO:0051087 -

GO:0000774

adenyl-nucleotide exchange factor activity

Details: 
Stimulates the hydrolysis and exchange of adenyl nucleotides by other proteins.
GO Category: 
MF

GO:0006457

protein folding

Details: 
The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO Category: 
BP

GO:0042803

protein homodimerization activity

Details: 
Interacting selectively and non-covalently with an identical protein to form a homodimer.
GO Category: 
MF

GO:0051087

chaperone binding

Details: 
Interacting selectively and non-covalently with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport.
GO Category: 
MF

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