34344 Mito_carr
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
34344 chr_5 Mito_carr 741033 743861 + Mito_carr

Synonyms

NCBI ID Ensembl Genomes exon ID
7446428 Thaps34344.1, Thaps34344.2, Thaps34344.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0235

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0020
 0.47

Most Highly Correlated Transcripts

261823

FIG superfamily
0.9087

36007

Aldolase_II superfamily
0.864

263788

amino acid/polyamine transporter
0.8627

39941

PRK13357
0.8595

41655

Chloroa_b-bind
0.8512

30701

PRK05279
0.8488

268443

SAICAR_synt_Sc
0.8371

19158

GRX_PICOT_like
0.8367

264598

AAA
0.8345

36525

PRK09427
0.8331

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 81.5267 8.83E-19 414 - 489 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 81.5267 8.83E-19 414 - 489 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 81.5267 8.83E-19 414 - 489 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 81.5267 8.83E-19 414 - 489 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 81.5267 8.83E-19 414 - 489 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 81.5267 8.83E-19 414 - 489 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 81.5267 8.83E-19 414 - 489 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 81.5267 8.83E-19 414 - 489 superfamily 249634
PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional - 63.6338 1.69E-11 202 - 476 multi-dom 240302

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_13856 PHATRDRAFT_13856 202117 233284 Not available Not available Not available 505429

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005488 GO:0006810 GO:0016020 GO:0005743 -

GO:0005488

binding

Details: 
The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

GO:0005743

mitochondrial inner membrane

Details: 
The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae.
GO Category: 
CC

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