34647 ARO8
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
34647 chr_6 ARO8 1232302 1233253 - ARO8

Synonyms

NCBI ID Ensembl Genomes exon ID
7442399 Thaps34647.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0410

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0034
 0.54

Most Highly Correlated Transcripts

bd1786

(bd1786) GLTP superfamily
0.8716

bd1808

(bd1808) NA
0.8583

5820

hypothetical protein
0.8564

8728

hypothetical protein
0.8453

bd410

(bd410) HNHc
0.8426

bd1793

(bd1793) NA
0.8389

8309

Pkinase
0.831

bd1842

(bd1842) NA
0.8307

bd1941

(bd1941) NA
0.8239

4108

hypothetical protein
0.8221

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent... cl18945 178.304 1.12E-52 18 - 310 specific 99734
AAT_I superfamily Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent... - 178.304 1.12E-52 18 - 310 superfamily 267298
ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR... - 258.414 3.36E-82 18 - 316 multi-dom 224089

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 68512 Cre14.g608700.t1.2 Not available Not available

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

Not available -

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