34773 ALG3 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
34773 chr_6 ALG3 superfamily 1117353 1118786 + ALG3 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7442373 Thaps34773.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0172

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0181
 0.40

Most Highly Correlated Transcripts

261400

NA
0.9339

18469

FkpA
0.9186

2669

MmsB
0.9045

1385

DUF4137
0.9008

25302

hypothetical protein
0.9008

264492

Peptidase_C1A
0.9004

23516

hypothetical protein
0.8984

263536

P4Hc
0.8971

8784

hypothetical protein
0.8969

15464

PCI
0.8963

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ALG3 superfamily ALG3 protein; The formation of N-glycosidic linkages of glycoproteins involves the ordered assembly... - 298.569 1.10E-96 45 - 445 superfamily 253087

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_10976 PHATRDRAFT_10976 180557 181812 426313 Not available AT2G47760.3 323848

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0000030 GO:0005783 GO:0016021 GO:0004584 -

GO:0000030

mannosyltransferase activity

Details: 
Catalysis of the transfer of a mannosyl group to an acceptor molecule, typically another carbohydrate or a lipid.
GO Category: 
MF

GO:0005783

endoplasmic reticulum

Details: 
The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
GO Category: 
CC

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

GO:0004584

dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase activity

Details: 
Catalysis of the transfer of an alpha-D-mannosyl residue from dolichyl-phosphate D-mannose into membrane lipid-linked oligosaccharide.
GO Category: 
MF

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