18469 FkpA
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
18469 chr_4 FkpA 1617611 1618565 - FkpA

Synonyms

NCBI ID Ensembl Genomes exon ID
7451904 Thaps18469.2, Thaps18469.3, Thaps18469.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0028

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0183
 0.30

Most Highly Correlated Transcripts

23516

hypothetical protein
0.9426

17707

NADB_Rossmann superfamily
0.9376

1219

PAP_fibrillin superfamily
0.9319

261400

NA
0.9271

4876

hypothetical protein
0.9267

7191

Aldo_ket_red
0.9264

31829

CBS_like
0.9231

261126

DadA
0.9224

7249

(ARF5) Ras_like_GTPase superfamily
0.9215

2488

hypothetical protein
0.9192

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
FKBP_C FKBP-type peptidyl-prolyl cis-trans isomerase; FKBP-type peptidyl-prolyl cis-trans isomerase. cl19519 106.942 2.65E-29 69 - 155 specific 249719
FKBP_C superfamily FKBP-type peptidyl-prolyl cis-trans isomerase; FKBP-type peptidyl-prolyl cis-trans isomerase. - 106.942 2.65E-29 69 - 155 superfamily 267872
FkpA FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover... - 169.903 4.89E-52 33 - 158 multi-dom 223619

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
14527 PHATRDRAFT_6282 PHATRDRAFT_6282 206881 313890 419949 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006457 GO:0003755 GO:0004600 GO:0030051 GO:0042027 -

GO:0006457

protein folding

Details: 
The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO Category: 
BP

GO:0003755

peptidyl-prolyl cis-trans isomerase activity

Details: 
Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).
GO Category: 
MF

GO:0004600

NA

Details: 
NA
GO Category: 
NA

GO:0030051

NA

Details: 
NA
GO Category: 
NA

GO:0042027

NA

Details: 
NA
GO Category: 
NA

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