3529 DnaQ_like_exo superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3529 chr_3 DnaQ_like_exo superfamily 1177444 1179978 + DnaQ_like_exo superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7441885 Thaps3529.3, Thaps3529.2, Thaps3529.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0138

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0071
 0.35

Most Highly Correlated Transcripts

4465

hypothetical protein
0.8928

268266

KBL_like
0.8799

268908

Trans_IPPS_HH
0.8792

7444

hypothetical protein
0.8791

9419

hypothetical protein
0.8786

28125

PLN00203
0.8727

21957

PAP_fibrillin superfamily
0.8692

16737

Mito_carr
0.8658

36669

TPT
0.8642

268592

VDE superfamily
0.8626

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DnaQ_like_exo superfamily DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily; The DnaQ-like... - 79.2596 1.03E-16 633 - 757 superfamily 263941

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 249917 242146 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003676 GO:0005622 GO:0008408 -

GO:0003676

nucleic acid binding

Details: 
Interacting selectively and non-covalently with any nucleic acid.
GO Category: 
MF

GO:0005622

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

GO:0008408

3'-5' exonuclease activity

Details: 
Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end.
GO Category: 
MF

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