11641 GluZincin superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
11641	chr_20	GluZincin superfamily	741456	746629	+	GluZincin superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7443645	Thaps11641.5, Thaps11641.3, Thaps11641.9, Thaps11641.2, Thaps11641.10, Thaps11641.1, Thaps11641.7, Thaps11641.8, Thaps11641.6, Thaps11641.4

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0386

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0043	0.36	170 25000

Most Highly Correlated Transcripts

9555 hypothetical protein 0.8615	24243 hypothetical protein 0.844	21653 hypothetical protein 0.8339	23770 hypothetical protein 0.8331	1436 hypothetical protein 0.8314	21880 hypothetical protein 0.8255
20728 hypothetical protein 0.8199	8147 hypothetical protein 0.8175	24561 hypothetical protein 0.813	14700 WD40 superfamily 0.813

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
GluZincin superfamily		Peptidase Gluzincin family (thermolysin-like proteinases, TLPs) includes peptidases M1, M2, M3, M4...	-	84.7317	9.32E-18	640 - 853	superfamily	265459

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0006508 GO:0008237 GO:0008270 -

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