35402 (ALAT_2) PTZ00377
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
35402 chr_7 (ALAT_2) PTZ00377 976210 977898 + PTZ00377

Synonyms

NCBI ID Ensembl Genomes exon ID
7444128 Thaps35402.3, Thaps35402.1, Thaps35402.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0052

Most Highly Correlated Transcripts

bd258

(bd258) HU
0.8586

36310

Peptidase_M48
0.8556

262977

NA
0.8512

6028

NA
0.8417

13393

PLN02321
0.834

4524

DHQS
0.8264

20663

UbiH
0.8263

262510

Alg6_Alg8 superfamily
0.8213

38964

Chorismate_synthase
0.816

bd974

(bd974) DUF751
0.8109

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent... cl18945 182.156 2.89E-52 95 - 491 specific 99734
AAT_I superfamily Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent... - 182.156 2.89E-52 95 - 491 superfamily 267298
PTZ00377 alanine aminotransferase; Provisional - 625.452 0 16 - 501 multi-dom 240391

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_34010 PHATRDRAFT_34010 179924 297635 Not available Cre06.g284700.t1.2 AT1G23310.1 476244

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0009058 GO:0016847 GO:0016769 GO:0004021 -

GO:0009058

biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO Category: 
BP

GO:0016847

1-aminocyclopropane-1-carboxylate synthase activity

Details: 
Catalysis of the reaction: S-adenosyl-L-methionine(1+) = 1-aminocyclopropane-1-carboxylate + S-methyl-5'-thioadenosine + H(+).
GO Category: 
MF

GO:0016769

transferase activity, transferring nitrogenous groups

Details: 
Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor).
GO Category: 
MF

GO:0004021

L-alanine:2-oxoglutarate aminotransferase activity

Details: 
Catalysis of the reaction: 2-oxoglutarate + L-alanine = L-glutamate + pyruvate.
GO Category: 
MF

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