35544 (Tp_Myb2R4) SANT
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
35544 chr_7 (Tp_Myb2R4) SANT 1312120 1313765 - SANT
NCBI ID Ensembl Genomes exon ID
7450669 Thaps35544.2, Thaps35544.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0089
Normalized Mean Residue
Thaps_bicluster_0039
0.52
Aldolase_II superfamily
0.8999
hypothetical protein
0.8835
hypothetical protein
0.8778
hypothetical protein
0.8735
SAICAR_synt_Sc
0.8683
PRK05279
0.866
Glycos_transf_1 superfamily
0.8653
(Tp_CCHH12) regulator [Rayko]
0.863
FBPase
0.8629
hypothetical protein
0.861
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SANT 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain... cl17250 64.9042 2.64E-13 366 - 409 specific 238096
SANT superfamily 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain... - 64.9042 2.64E-13 366 - 409 superfamily 266586
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0003677 GO:0005634 -

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC
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