35721 PTZ00273
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
35721 chr_7 PTZ00273 1015793 1016884 + PTZ00273

Synonyms

NCBI ID Ensembl Genomes exon ID
7447052 Thaps35721.3, Thaps35721.2, Thaps35721.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0362

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0035
 0.44

Most Highly Correlated Transcripts

23517

PRK13759
0.9048

9174

DUF563
0.8693

4294

hypothetical protein
0.8626

21227

hypothetical protein
0.8606

21074

hypothetical protein
0.86

10925

hypothetical protein
0.8592

3071

NA
0.8589

2494

UAA
0.8581

3803

hypothetical protein
0.8574

11386

hypothetical protein
0.8477

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DIOX_N superfamily non-haem dioxygenase in morphine synthesis N-terminal; This is the highly conserved N-terminal... - 85.3698 8.22E-21 4 - 128 superfamily 258418
DIOX_N superfamily non-haem dioxygenase in morphine synthesis N-terminal; This is the highly conserved N-terminal... - 85.3698 8.22E-21 4 - 128 superfamily 258418
2OG-FeII_Oxy superfamily 2OG-Fe(II) oxygenase superfamily; This family contains members of the 2-oxoglutarate (2OG) and Fe(... - 77.835 3.68E-18 182 - 287 superfamily 251775
2OG-FeII_Oxy superfamily 2OG-Fe(II) oxygenase superfamily; This family contains members of the 2-oxoglutarate (2OG) and Fe(... - 77.835 3.68E-18 182 - 287 superfamily 251775
PTZ00273 oxidase reductase; Provisional - 188.043 1.45E-56 3 - 332 multi-dom 140299

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
6365 Not available 180155 284425 61413 Not available Not available 303182

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005506 GO:0016216 GO:0017000 -

GO:0005506

iron ion binding

Details: 
Interacting selectively and non-covalently with iron (Fe) ions.
GO Category: 
MF

GO:0016216

isopenicillin-N synthase activity

Details: 
Catalysis of the reaction: N-[(5S)-5-amino-5-carboxypentanoyl]-L-cysteinyl-D-valine + O(2) = 2 H(2)O + isopenicillin N.
GO Category: 
MF

GO:0017000

antibiotic biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms.
GO Category: 
BP

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