35855 PH-like_bacteria
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
35855 chr_8 PH-like_bacteria 498094 498888 + PH-like_bacteria

Synonyms

NCBI ID Ensembl Genomes exon ID
7445583 Thaps35855.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0484

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0124
 0.37

Most Highly Correlated Transcripts

264576

lysozyme_like superfamily
0.8723

5321

CobN-Mg_chel superfamily
0.8696

261660

GH18_chitinase-like superfamily
0.868

262527

pi 4-kinase
0.8642

4959

hypothetical protein
0.863

263734

LRR_RI superfamily
0.8625

262152

hypothetical protein
0.8623

25048

hypothetical protein
0.8612

262645

Glyco_18
0.8605

264577

lysozyme_like superfamily
0.8596

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PH-like_bacteria Pleckstrin homology (PH)-like domains in bacteria (PHb); Pleckstrin homology (PH) domains were... cl17171 101.837 3.50E-27 37 - 133 specific 241379
PH-like superfamily Pleckstrin homology-like domain; The PH-like family includes the PH domain, both the Shc-like and... - 80.7127 3.04E-19 169 - 239 superfamily 266526
PH-like superfamily Pleckstrin homology-like domain; The PH-like family includes the PH domain, both the Shc-like and... - 80.7127 3.04E-19 169 - 239 superfamily 266526

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 222614 236933 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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