35934 Cytochrom_C superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
35934	chr_8	Cytochrom_C superfamily	311875	312448	-	Cytochrom_C superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445547	Thaps35934.1, Thaps35934.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0022

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0262	0.15	400 2500

Most Highly Correlated Transcripts

bd1820 (bd1820) Fasciclin 0.9941	bd1160 (bd1160) Chloroa_b-bind superfamily 0.9872	bd218 (bd218) Chloroa_b-bind superfamily 0.9842	270210 (PsbO) oxygen-evolving enhancer protein 1 precursor 0.9701	11501 (FCP3) Chloroa_b-bind 0.9677	20603 hypothetical protein 0.9659
bd1306 (bd1306) NA 0.9658	38494 PLN00120 0.9657	268304 hypothetical protein 0.9652	21472 NA 0.9652

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Cytochrom_C superfamily		Cytochrome c; The Pfam entry does not include all Prosite members. The cytochrome 556 and...	-	139.525	4.38E-43	41 - 132	superfamily	264358

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_44056	PHATRDRAFT_44056	271949	307662	417816	Cre16.g651050.t1.2	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0005489 GO:0006118 -

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