3660 COG5038Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
3660	chr_3	COG5038	1478477	1482022	-	COG5038

Synonyms

NCBI ID	Ensembl Genomes exon ID
7449498	Thaps3660.3, Thaps3660.4, Thaps3660.5, Thaps3660.1, Thaps3660.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0153

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0033	0.48	0.000000021 0.013

Most Highly Correlated Transcripts

bd392 (bd392) DEXDc 0.9433	8384 hypothetical protein 0.9134	24562 hypothetical protein 0.9112	bd874 (bd874) NA 0.908	1566 hypothetical protein 0.9079	263483 CHD 0.9047
24018 hypothetical protein 0.902	7121 DUF3684 superfamily 0.8984	21463 hypothetical protein 0.8982	3719 DECH_helic 0.8977

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
COG5038		Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only]	-	105.226	3.96E-23	828 - 1031	multi-dom	227371

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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