37824 Peptidase_C1A
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
37824 chr_16b Peptidase_C1A 112784 113994 - Peptidase_C1A

Synonyms

NCBI ID Ensembl Genomes exon ID
7442583 Thaps37824.3, Thaps37824.2, Thaps37824.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0327

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0147
 0.38

Most Highly Correlated Transcripts

bd690

(bd690) NA
0.9545

bd1934

(bd1934) NA
0.9437

bd643

(bd643) NA
0.9158

bd877

(bd877) NA
0.8918

bd738

(bd738) NA
0.8766

5904

NhaP
0.8739

bd1801

(bd1801) NA
0.8712

bd1840

(bd1840) NA
0.8653

24565

COG3899
0.8421

11072

hypothetical protein
0.8351

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_C1A Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs)... cl00298 215.566 1.94E-68 22 - 265 specific 239068
Peptidase_C1 superfamily C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed... - 215.566 1.94E-68 22 - 265 superfamily 260335

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45795 PHATRDRAFT_45795 162698 251601 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004197 GO:0006508 GO:0008234 -

GO:0004197

cysteine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
GO Category: 
MF

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008234

cysteine-type peptidase activity

Details: 
Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
GO Category: 
MF

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