38006 FKBP_C
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
38006 chr_17 FKBP_C 375112 375541 - FKBP_C

Synonyms

NCBI ID Ensembl Genomes exon ID
7442118 Thaps38006.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0220

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0199
 0.24

Most Highly Correlated Transcripts

bd1709

(bd1709) NA
0.9756

22985

WD40 superfamily
0.9263

29018

NMD3
0.9256

32395

RNA_pol
0.9251

bd96

(bd96) eIF-3_zeta
0.9246

268735

(GPB1) WD40
0.9207

bd1667

(bd1667) Mpp10
0.9198

24849

(Tp_CCCH8) DnaQ_like_exo superfamily
0.9187

40341

WD40 superfamily
0.9174

268145

PLN00040
0.9154

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
FKBP_C FKBP-type peptidyl-prolyl cis-trans isomerase; FKBP-type peptidyl-prolyl cis-trans isomerase. cl19519 102.319 1.15E-28 49 - 139 specific 249719
FKBP_C superfamily FKBP-type peptidyl-prolyl cis-trans isomerase; FKBP-type peptidyl-prolyl cis-trans isomerase. - 102.319 1.15E-28 49 - 139 superfamily 267872

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Cre14.g616100.t1.1 AT5G05420.1 309379

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006457 GO:0003755 GO:0004600 GO:0030051 GO:0042027 -

GO:0006457

protein folding

Details: 
The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO Category: 
BP

GO:0003755

peptidyl-prolyl cis-trans isomerase activity

Details: 
Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).
GO Category: 
MF

GO:0004600

NA

Details: 
NA
GO Category: 
NA

GO:0030051

NA

Details: 
NA
GO Category: 
NA

GO:0042027

NA

Details: 
NA
GO Category: 
NA

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