38060 DRMBLThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
38060	chr_18	DRMBL	423817	426325	-	DRMBL

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442985	Thaps38060.2, Thaps38060.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0133

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0039	0.52	1.1 1.5

Most Highly Correlated Transcripts

4333 hypothetical protein 0.9036	bd1851 (bd1851) NA 0.9021	5519 hypothetical protein 0.8944	20868 hypothetical protein 0.8917	11664 DUF3510 0.8871	3842 hypothetical protein 0.8868
21778 hypothetical protein 0.886	11300 hypothetical protein 0.8844	9364 hypothetical protein 0.8832	5778 hypothetical protein 0.8778

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DRMBL superfamily		DNA repair metallo-beta-lactamase; The metallo-beta-lactamase fold contains five sequence motifs....	-	104.701	2.94E-26	675 - 793	superfamily	254258
DRMBL superfamily		DNA repair metallo-beta-lactamase; The metallo-beta-lactamase fold contains five sequence motifs....	-	104.701	2.94E-26	675 - 793	superfamily	254258

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_32290	PHATRDRAFT_32290	185579	233899	209392	Cre09.g399907.t1.1	AT3G26680.3	472505

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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