11664 DUF3510Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
11664	chr_22	DUF3510	30917	33752	-	DUF3510

Synonyms

NCBI ID	Ensembl Genomes exon ID
7443658	Thaps11664.3, Thaps11664.2, Thaps11664.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0119

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0080	0.40	0.0016 0.000042

Most Highly Correlated Transcripts

8885 DUF3510 0.944	264762 0.9195	4333 hypothetical protein 0.9047	25688 Hira superfamily 0.9045	8821 CHD 0.9031	11695 hypothetical protein 0.9026
11300 hypothetical protein 0.8992	24364 AarF 0.8946	12091 DUF4033 0.8927	1249 hypothetical protein 0.8916

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF3510 superfamily		Domain of unknown function (DUF3510); This presumed domain is functionally uncharacterized. This...	-	100.446	1.95E-24	730 - 848	superfamily	256805
DUF3510 superfamily		Domain of unknown function (DUF3510); This presumed domain is functionally uncharacterized. This...	-	100.446	1.95E-24	730 - 848	superfamily	256805

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_44776	PHATRDRAFT_44776	271373	251169	Not available	Cre09.g402750.t1.2	AT4G24840.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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