3853 DUF3493
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3853 chr_3 DUF3493 1962972 1967115 - DUF3493

Synonyms

NCBI ID Ensembl Genomes exon ID
7452070 Thaps3853.2, Thaps3853.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0029

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0168
 0.24

Most Highly Correlated Transcripts

bd1161

(bd1161) NA
0.9744

268592

VDE superfamily
0.956

bd718

(bd718) PRK10387
0.9386

574

PRK05444
0.933

31829

CBS_like
0.9225

268908

Trans_IPPS_HH
0.91

1155

hypothetical protein
0.906

5504

hypothetical protein
0.9057

268192

Zip superfamily
0.9039

bd218

(bd218) Chloroa_b-bind superfamily
0.9029

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DUF3493 superfamily Protein of unknown function (DUF3493); This family of proteins is functionally uncharacterized.... - 74.6289 8.87E-16 1028 - 1107 superfamily 256787
DUF3493 superfamily Protein of unknown function (DUF3493); This family of proteins is functionally uncharacterized.... - 74.6289 8.87E-16 1028 - 1107 superfamily 256787
LPA1 LOW PSII ACCUMULATION1; Provisional - 72.9978 1.99E-13 1011 - 1296 multi-dom 215573

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45569 PHATRDRAFT_45569 270040 5234 Not available Not available AT4G28740.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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