38890 Mito_carr
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
38890 chr_24 Mito_carr 71866 73457 + Mito_carr

Synonyms

NCBI ID Ensembl Genomes exon ID
7448927 Thaps38890.3, Thaps38890.2, Thaps38890.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0427

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0023
 0.43

Most Highly Correlated Transcripts

31862

PP2Cc
0.8709

35136

NA
0.8409

269624

TIM_phosphate_binding superfamily
0.8238

bd174

(bd174) Tim17 superfamily
0.82

36007

Aldolase_II superfamily
0.8198

23806

Nuc_sug_transp
0.813

16114

PLN02350
0.8119

24631

hypothetical protein
0.8097

27318

hypothetical protein
0.8083

37118

FeThRed_B
0.8049

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 59.9555 7.16E-12 1 - 76 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 59.9555 7.16E-12 1 - 76 superfamily 249634

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_23723 PHATRDRAFT_23723 Not available 255388 Not available Not available AT5G27520.1 488160

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005488 GO:0006810 GO:0016020 -

GO:0005488

binding

Details: 
The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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