3893 Methyltransf_31Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
3893	chr_3	Methyltransf_31	2054911	2057295	+	Methyltransf_31

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452089	Thaps3893.3, Thaps3893.2, Thaps3893.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0003

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0112	0.40	0.000000031 43000

Most Highly Correlated Transcripts

907 hypothetical protein 0.8175	263475 hypothetical protein 0.7996	7885 HP_PGM_like 0.7888	1899 hypothetical protein 0.784	9261 HP_PGM_like 0.774	2039 hypothetical protein 0.7664
2906 hypothetical protein 0.7617	21108 PKc_like superfamily 0.7555	34191 CobN_like 0.7545	23359 hypothetical protein 0.7515

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Methyltransf_31		Methyltransferase domain; This family appears to be have methyltransferase activity.	-	64.3655	4.28E-12	129 - 262	multi-dom	258120

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	240252	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0008757 GO:0008168 -

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