3906 Mito_carr
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3906 chr_3 Mito_carr 2090026 2091241 - Mito_carr

Synonyms

NCBI ID Ensembl Genomes exon ID
7452097 Thaps3906.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0122

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0249
 0.31

Most Highly Correlated Transcripts

bd415

(bd415) arom_aa_hydroxylase superfamily
0.9761

bd1841

(bd1841) CAP10 superfamily
0.9714

bd410

(bd410) HNHc
0.9486

269127

(ACD3) ACAD superfamily
0.9178

bd1941

(bd1941) NA
0.9152

bd1839

(bd1839) NA
0.9112

23047

hypothetical protein
0.9111

35350

PKc_like superfamily
0.9032

36291

PLN02528
0.9017

bd1756

(bd1756) NA
0.8987

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 58.4147 7.59E-11 133 - 191 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 58.4147 7.59E-11 133 - 191 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 58.4147 7.59E-11 133 - 191 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 58.4147 7.59E-11 133 - 191 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 58.4147 7.59E-11 133 - 191 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 58.4147 7.59E-11 133 - 191 superfamily 249634

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_13752 PHATRDRAFT_13752 207310 Not available 116253 Cre06.g267800.t1.1 AT2G46320.1 354793

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005488 GO:0006810 GO:0016020 GO:0005743 -

GO:0005488

binding

Details: 
The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

GO:0005743

mitochondrial inner membrane

Details: 
The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae.
GO Category: 
CC

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