39754 (TRXR1) TGR
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
39754 chr_2 (TRXR1) TGR 2585712 2588076 - TGR

Synonyms

NCBI ID Ensembl Genomes exon ID
7452954 Thaps39754.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0033

Most Highly Correlated Transcripts

19977

TRX_family
0.8862

36078

PRX5_like
0.8762

268343

NA
0.8755

22673

NA
0.8695

36037

Trypsin_2
0.8617

22432

UBCc
0.8616

268192

Zip superfamily
0.8587

38924

PLN02627
0.8569

36525

PRK09427
0.8562

36641

Aldolase_Class_I superfamily
0.8511

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Pyr_redox_dim superfamily Pyridine nucleotide-disulphide oxidoreductase, dimerization domain; This family includes both class... - 109.96 1.96E-28 512 - 622 superfamily 251571
Pyr_redox_dim superfamily Pyridine nucleotide-disulphide oxidoreductase, dimerization domain; This family includes both class... - 109.96 1.96E-28 512 - 622 superfamily 251571
Pyr_redox superfamily Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II... - 73.3615 8.34E-16 341 - 420 superfamily 249559
Pyr_redox superfamily Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II... - 73.3615 8.34E-16 341 - 420 superfamily 249559
TGR thioredoxin and glutathione reductase selenoprotein; This homodimeric, FAD-containing member of the... - 602.227 0 146 - 637 multi-dom 233412

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_42129 PHATRDRAFT_42129 208692 257115 417208 Cre08.g368400.t1.2 Not available 348901

KEGG

KEGG description KEGG Pathway
Pyrimidine metabolism map00240

GO Terms

GO:0006118 GO:0016491 GO:0015036 GO:0005737 GO:0016654 GO:0004362 -

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0015036

disulfide oxidoreductase activity

Details: 
Catalysis of the reaction: substrate with reduced sulfide groups = substrate with oxidized disulfide bonds.
GO Category: 
MF

GO:0005737

cytoplasm

Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO Category: 
CC

GO:0016654

NA

Details: 
NA
GO Category: 
NA

GO:0004362

glutathione-disulfide reductase activity

Details: 
Catalysis of the reaction: 2 glutathione + NADP+ = glutathione disulfide + NADPH + H+.
GO Category: 
MF

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