4002 Peptidase_M14_like superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
4002	chr_3	Peptidase_M14_like superfamily	2329041	2329950	-	Peptidase_M14_like superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452756	Thaps4002.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0210

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0224	0.27	0.00001 49

Most Highly Correlated Transcripts

270222 0.9873	7060 hypothetical protein 0.9124	11186 hypothetical protein 0.903	262313 Chloroa_b-bind superfamily 0.9011	2577 hypothetical protein 0.8923	37338 Thioredoxin_like superfamily 0.8921
20405 GRX_GRXh_1_2_like 0.8884	261744 PTZ00088 0.8832	5098 hypothetical protein 0.8823	39813 Chloroa_b-bind superfamily 0.8815

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Peptidase_M14_like superfamily		M14 family of metallocarboxypeptidases and related proteins; The M14 family of...	-	192.609	1.02E-59	61 - 266	superfamily	264346

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	230394	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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