41372 EFh
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
41372 chr_7 EFh 1302309 1303464 + EFh

Synonyms

NCBI ID Ensembl Genomes exon ID
7447109 Thaps41372.1, Thaps41372.2, Thaps41372.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0244

Most Highly Correlated Transcripts

269724

PP2Cc
0.8976

38472

HA2
0.8919

269925

AAA_12 superfamily
0.8876

262965

0.8844

7151

hypothetical protein
0.8757

1175

hypothetical protein
0.8752

19421

HECT
0.875

24776

LRR_RI superfamily
0.873

4267

COG0790
0.8718

4108

hypothetical protein
0.8665

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 56.4021 8.45E-11 141 - 200 superfamily 238008
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 56.4021 8.45E-11 141 - 200 superfamily 238008
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 56.4021 8.45E-11 141 - 200 superfamily 238008
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 56.4021 8.45E-11 141 - 200 superfamily 238008

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Phosphatidylinositol signaling system map04070

GO Terms

GO:0005509 -

GO:0005509

calcium ion binding

Details: 
Interacting selectively and non-covalently with calcium ions (Ca2+).
GO Category: 
MF

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