41548 (GALE3) PLN02695
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
41548 chr_8 (GALE3) PLN02695 572318 573576 + PLN02695

Synonyms

NCBI ID Ensembl Genomes exon ID
7445599 Thaps41548.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0210

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0173
 0.35

Most Highly Correlated Transcripts

270222

0.954

263827

PKc_like superfamily
0.8332

268192

Zip superfamily
0.8252

36037

Trypsin_2
0.8244

35878

PLN02307
0.8204

25772

(ACT1) ACTIN
0.8195

36078

PRX5_like
0.8168

25933

tpt
0.8159

14192

PLN02449
0.8067

38924

PLN02627
0.8063

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 439.993 4.39E-154 16 - 336 superfamily 263925
PLN02695 GDP-D-mannose-3',5'-epimerase - 668.439 0 2 - 362 multi-dom 178298

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45434 PHATRDRAFT_45434 270043 35782 433869 Cre01.g019250.t1.2 AT5G28840.2 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003824 GO:0009225 GO:0048040 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0009225

nucleotide-sugar metabolic process

Details: 
The cellular chemical reactions and pathways involving nucleotide-sugars, any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative.
GO Category: 
BP

GO:0048040

UDP-glucuronate decarboxylase activity

Details: 
Catalysis of the reaction: H(+) + UDP-alpha-D-glucuronate = CO(2) + UDP-alpha-D-xylose.
GO Category: 
MF

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