42307 GTP_HflX
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
42307 chr_14 GTP_HflX 141402 143458 - GTP_HflX

Synonyms

NCBI ID Ensembl Genomes exon ID
7450829 Thaps42307.1, Thaps42307.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0041

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0088
 0.37

Most Highly Correlated Transcripts

42000

PRK05912
0.8864

270222

0.885

40034

thrS
0.8468

bd1823

(bd1823) SCP superfamily
0.8444

21858

PRK11819
0.8326

37166

(RK17) rplQ
0.8283

32066

Mito_carr
0.8132

22508

hypothetical protein
0.8123

28100

DHBP_synthase
0.8104

bd1439

(bd1439) ycf35
0.8078

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HflX HflX GTPase family; HflX subfamily. A distinct conserved domain with a glycine-rich segment N-... cl17170 305.152 1.83E-99 356 - 565 specific 206666
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 305.152 1.83E-99 356 - 565 superfamily 266525
GTP-bdg_N superfamily GTP-binding GTPase N-terminal; This is the N-terminal region of GTP-binding HflX-like proteins. The... - 72.1316 3.66E-15 203 - 309 superfamily 205348
GTP_HflX GTP-binding protein HflX; This protein family is one of a number of homologous small, well-... - 484.281 9.93E-167 209 - 565 multi-dom 234125

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
7322 PHATRDRAFT_1719 PHATRDRAFT_1719 227128 305146 470200 Cre16.g665650.t1.1 AT5G57960.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005525 -

GO:0005525

GTP binding

Details: 
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO Category: 
MF

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