42867 Cytochrom_C1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
42867 chr_19c_29 Cytochrom_C1 268564 270385 + Cytochrom_C1

Synonyms

NCBI ID Ensembl Genomes exon ID
7444417 Thaps42867.1, Thaps42867.3, Thaps42867.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0443

Most Highly Correlated Transcripts

22596

PLN02296
0.9323

35136

NA
0.9213

30701

PRK05279
0.9208

36007

Aldolase_II superfamily
0.916

36107

PqqL
0.9147

29359

OSCP
0.9141

261627

(GPX2) GSH_Peroxidase
0.9125

22673

NA
0.9124

3229

hypothetical protein
0.9106

26002

2Fe-2S_thioredx
0.9106

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Cytochrom_C1 Cytochrome C1 family; Cytochrome C1 family. cl11414 324.868 4.99E-112 50 - 266 specific 251131
Cytochrom_C superfamily Cytochrome c; The Pfam entry does not include all Prosite members. The cytochrome 556 and... - 324.868 4.99E-112 50 - 266 superfamily 264358
CYT1 Cytochrome c1 [Energy production and conversion] - 211.111 5.89E-67 33 - 266 multi-dom 225413

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_26515 PHATRDRAFT_26515 212206 284355 311819 Cre15.g638500.t1.2 AT5G40810.1 356216

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0005489 GO:0005746 GO:0006118 GO:0008121 -

GO:0005489

NA

Details: 
NA
GO Category: 
NA

GO:0005746

mitochondrial respiratory chain

Details: 
The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. The respiratory chain complexes transfer electrons from an electron donor to an electron acceptor and are associated with a proton pump to create a transmembrane electrochemical gradient.
GO Category: 
CC

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0008121

ubiquinol-cytochrome-c reductase activity

Details: 
Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: CoQH2 + 2 ferricytochrome c = CoQ + 2 ferrocytochrome c + 2 H+.
GO Category: 
MF

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