36107 PqqLThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
36107	chr_9	PqqL	1184084	1184623	+	PqqL

Synonyms

NCBI ID	Ensembl Genomes exon ID
7451019	Thaps36107.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0180

Most Highly Correlated Transcripts

23960 hypothetical protein 0.9301	25040 NA 0.9244	29359 OSCP 0.9242	26002 2Fe-2S_thioredx 0.9217	31113 Cyt_c_Oxidase_VIb 0.9211	42867 Cytochrom_C1 0.9147
8461 hypothetical protein 0.9117	3229 hypothetical protein 0.9113	25025 PHear_NECAP 0.9098	31993 DUF3449 0.9051

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PqqL		Predicted Zn-dependent peptidases [General function prediction only]	-	79.4261	8.59E-18	2 - 168	multi-dom	223685

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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