4980 TRAM_LAG1_CLN8
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
4980 chr_5 TRAM_LAG1_CLN8 75539 76502 - TRAM_LAG1_CLN8

Synonyms

NCBI ID Ensembl Genomes exon ID
7448443 Thaps4980.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0208

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0197
 0.29

Most Highly Correlated Transcripts

7160

hypothetical protein
0.9266

31829

CBS_like
0.9199

261422

(MAP4) MetAP1
0.9131

268592

VDE superfamily
0.909

35684

dak_ATP
0.9036

23516

hypothetical protein
0.9026

268773

Gst
0.9

7597

2A0111
0.8985

2678

Rotamase
0.8972

5135

Rubis-subs-bind
0.8962

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TRAM_LAG1_CLN8 TLC domain; TLC domain. cl02759 76.166 9.40E-17 100 - 305 specific 252170
TRAM_LAG1_CLN8 superfamily TLC domain; TLC domain. - 76.166 9.40E-17 100 - 305 superfamily 261432

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 463067 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016021 -

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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