5135 Rubis-subs-bind
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
5135 chr_5 Rubis-subs-bind 432691 434761 - Rubis-subs-bind

Synonyms

NCBI ID Ensembl Genomes exon ID
7449687 Thaps5135.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0208

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0197
 0.29

Most Highly Correlated Transcripts

261422

(MAP4) MetAP1
0.9302

268773

Gst
0.9246

1383

(PDS1) phytoene_desat
0.9197

4171

hypothetical protein
0.9179

268592

VDE superfamily
0.9136

262207

Trp-synth-beta_II superfamily
0.9106

5415

Thioredoxin_like superfamily
0.9075

574

PRK05444
0.9071

13156

(ACS1) AFD_class_I superfamily
0.9006

5098

hypothetical protein
0.8991

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Rubis-subs-bind superfamily Rubisco LSMT substrate-binding; Members of this family adopt a multihelical structure, with an... - 75.4581 6.13E-16 502 - 633 superfamily 255262
Rubis-subs-bind superfamily Rubisco LSMT substrate-binding; Members of this family adopt a multihelical structure, with an... - 75.4581 6.13E-16 502 - 633 superfamily 255262

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_9653 PHATRDRAFT_9653 195439 259221 448733 Cre16.g661350.t1.2 AT1G14030.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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