5695 Rhomboid superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
5695 chr_5 Rhomboid superfamily 1856396 1857391 + Rhomboid superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7445234 Thaps5695.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0211

Most Highly Correlated Transcripts

38945

TRAPP superfamily
0.9007

20664

hypothetical protein
0.8941

5623

COG0637
0.8908

882

hypothetical protein
0.8899

3354

hypothetical protein
0.8894

904

hypothetical protein
0.8891

3913

LCM
0.8889

268266

KBL_like
0.8862

5034

hypothetical protein
0.8862

5584

P4Hc
0.8848

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Rhomboid superfamily Rhomboid family; This family contains integral membrane proteins that are related to Drosophila... - 70.715 3.81E-15 50 - 192 superfamily 264372

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_43673 PHATRDRAFT_43673 150492 323098 Not available Cre01.g050350.t1.1 AT3G58460.1 507191

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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