Intracellular trafficking, secretion, and vesicular transport

id: U
name: Intracellular trafficking, secretion, and vesicular transport
namespace: cog subcategory
type: cog
obsolete: False

Child Functions

COG0201Preprotein translocase subunit SecY
COG0341Preprotein translocase subunit SecF
COG0342Preprotein translocase subunit SecD
COG0541Signal recognition particle GTPase
COG0552Signal recognition particle GTPase
COG0597Lipoprotein signal peptidase
COG0616Periplasmic serine proteases (ClpP class)
COG0630Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis
COG0653Preprotein translocase subunit SecA (ATPase, RNA helicase)
COG0681Signal peptidase I
COG0690Preprotein translocase subunit SecE
COG0706Preprotein translocase subunit YidC
COG0740Protease subunit of ATP-dependent Clp proteases
COG0758Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake
COG0805Sec-independent protein secretion pathway component TatC
COG0811Biopolymer transport proteins
COG0823Periplasmic component of the Tol biopolymer transport system
COG0848Biopolymer transport protein
COG1157Flagellar biosynthesis/type III secretory pathway ATPase
COG1298Flagellar biosynthesis pathway, component FlhA
COG1314Preprotein translocase subunit SecG
COG1317Flagellar biosynthesis/type III secretory pathway protein
COG1338Flagellar biosynthesis pathway, component FliP
COG1377Flagellar biosynthesis pathway, component FlhB
COG1400Signal recognition particle 19 kDa protein
COG1450Type II secretory pathway, component PulD
COG1459Type II secretory pathway, component PulF
COG1516Flagellin-specific chaperone FliS
COG1538Outer membrane protein
COG1585Membrane protein implicated in regulation of membrane protease activity
COG1677Flagellar hook-basal body protein
COG1684Flagellar biosynthesis pathway, component FliR
COG1705Muramidase (flagellum-specific)
COG1766Flagellar biosynthesis/type III secretory pathway lipoprotein
COG1826Sec-independent protein secretion pathway components
COG1862Preprotein translocase subunit YajC
COG1886Flagellar motor switch/type III secretory pathway protein
COG1952Preprotein translocase subunit SecB
COG1955Archaeal flagella assembly protein J
COG1987Flagellar biosynthesis pathway, component FliQ
COG1989Type II secretory pathway, prepilin signal peptidase PulO and related peptidases
COG2064Flp pilus assembly protein TadC
COG2095Multiple antibiotic transporter
COG2165Type II secretory pathway, pseudopilin PulG
COG2443Preprotein translocase subunit Sss1
COG2747Negative regulator of flagellin synthesis (anti-sigma28 factor)
COG2804Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
COG2805Tfp pilus assembly protein, pilus retraction ATPase PilT
COG2831Hemolysin activation/secretion protein
COG2874Predicted ATPases involved in biogenesis of archaeal flagella
COG2882Flagellar biosynthesis chaperone
COG2948Type IV secretory pathway, VirB10 components
COG3031Type II secretory pathway, component PulC
COG3063Tfp pilus assembly protein PilF
COG3114Heme exporter protein D
COG3121P pilus assembly protein, chaperone PapD
COG3149Type II secretory pathway, component PulM
COG3156Type II secretory pathway, component PulK
COG3166Tfp pilus assembly protein PilN
COG3167Tfp pilus assembly protein PilO
COG3168Tfp pilus assembly protein PilP
COG3170Tfp pilus assembly protein FimV
COG3188P pilus assembly protein, porin PapC
COG3210Large exoproteins involved in heme utilization or adhesion
COG3215Tfp pilus assembly protein PilZ
COG3267Type II secretory pathway, component ExeA (predicted ATPase)
COG3297Type II secretory pathway, component PulL
COG3418Flagellar biosynthesis/type III secretory pathway chaperone
COG3419Tfp pilus assembly protein, tip-associated adhesin PilY1
COG3451Type IV secretory pathway, VirB4 components
COG3468Type V secretory pathway, adhesin AidA
COG3504Type IV secretory pathway, VirB9 components
COG3505Type IV secretory pathway, VirD4 components
COG3539P pilus assembly protein, pilin FimA
COG3678P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein
COG3701Type IV secretory pathway, TrbF components
COG3702Type IV secretory pathway, VirB3 components
COG3704Type IV secretory pathway, VirB6 components
COG3736Type IV secretory pathway, component VirB8
COG3745Flp pilus assembly protein CpaB
COG3838Type IV secretory pathway, VirB2 components (pilins)
COG3843Type IV secretory pathway, VirD2 components (relaxase)
COG3846Type IV secretory pathway, TrbL components
COG3847Flp pilus assembly protein, pilin Flp
COG3946Type IV secretory pathway, VirJ component
COG4023Preprotein translocase subunit Sec61beta
COG4473Predicted ABC-type exoprotein transport system, permease component
COG4537Competence protein ComGC
COG4669Type III secretory pathway, lipoprotein EscJ
COG4726Tfp pilus assembly protein PilX
COG4789Type III secretory pathway, component EscV
COG4790Type III secretory pathway, component EscR
COG4791Type III secretory pathway, component EscT
COG4792Type III secretory pathway, component EscU
COG4794Type III secretory pathway, component EscS
COG4795Type II secretory pathway, component PulJ
COG4796Type II secretory pathway, component HofQ
COG4940Competence protein ComGF
COG4959Type IV secretory pathway, protease TraF
COG4960Flp pilus assembly protein, protease CpaA
COG4961Flp pilus assembly protein TadG
COG4962Flp pilus assembly protein, ATPase CpaF
COG4963Flp pilus assembly protein, ATPase CpaE
COG4964Flp pilus assembly protein, secretin CpaC
COG4965Flp pilus assembly protein TadB
COG4966Tfp pilus assembly protein PilW
COG4967Tfp pilus assembly protein PilV
COG4968Tfp pilus assembly protein PilE
COG4969Tfp pilus assembly protein, major pilin PilA
COG4970Tfp pilus assembly protein FimT
COG4972Tfp pilus assembly protein, ATPase PilM
COG5008Tfp pilus assembly protein, ATPase PilU
COG5010Flp pilus assembly protein TadD, contains TPR repeats
COG5028Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3
COG5030Clathrin adaptor complex, small subunit
COG5032Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family
COG5043Vacuolar protein sorting-associated protein
COG5047Vesicle coat complex COPII, subunit SEC23
COG5052Protein involved in membrane traffic
COG5058Protein transporter of the TRAM (translocating chain-associating membrane) superfamily, longevity assurance factor
COG5061Oxidoreductin, endoplasmic reticulum membrane-associated protein involved in disulfide bond formation
COG5064Karyopherin (importin) alpha
COG5066VAMP-associated protein involved in inositol metabolism
COG5070Nucleotide-sugar transporter
COG5073Vacuolar import and degradation protein
COG5074t-SNARE complex subunit, syntaxin
COG5079Nuclear protein export factor
COG5080Rab GTPase interacting factor, Golgi membrane protein
COG5082Arginine methyltransferase-interacting protein, contains RING Zn-finger
COG5096Vesicle coat complex, various subunits
COG5101Importin beta-related nuclear transport receptor
COG5102Membrane protein involved in ER to Golgi transport
COG5117Protein involved in the nuclear export of pre-ribosomes
COG5120Membrane protein involved in Golgi transport
COG5122Transport protein particle (TRAPP) complex subunit
COG5128Transport protein particle (TRAPP) complex subunit
COG5130Prenylated rab acceptor 1 and related proteins
COG5143Synaptobrevin/VAMP-like protein
COG5153Putative lipase essential for disintegration of autophagic bodies inside the vacuole
COG5158Proteins involved in synaptic transmission and general secretion, Sec1 family
COG5167Protein involved in vacuole import and degradation
COG5171Ran GTPase-activating protein (Ran-binding protein)
COG5173Exocyst complex subunit SEC6
COG5196ER lumen protein retaining receptor
COG5215Karyopherin (importin) beta
COG5232Preprotein translocase subunit Sec62
COG5233Peripheral Golgi membrane protein
COG5240Vesicle coat complex COPI, gamma subunit
COG5249Golgi protein involved in Golgi-to-ER retrieval
COG5268Type IV secretory pathway, TrbD component
COG5295Autotransporter adhesin
COG5308Nuclear pore complex subunit
COG5314Conjugal transfer/entry exclusion protein
COG5325t-SNARE complex subunit, syntaxin
COG5347GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport
COG5391Phox homology (PX) domain protein
COG5407Preprotein translocase subunit Sec63
COG5538Preprotein translocase subunit Sec66

Parent Functions

35631Cellular processes and signaling