PITA_50 megaCluster: 4 Residual: 0.25

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
PITA_50 4 0.25 9 0 0.673251 0.892
Displaying 1 - 52 of 52
100504117 cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle), opposite strand

Details for - - cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle), opposite strand

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100504117

Tuberculist Genomic Region

100504320 predicted gene, 20169

Details for - - predicted gene, 20169

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100504320

Tuberculist Genomic Region

100504417 predicted gene, 20215

Details for - - predicted gene, 20215

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100504417

Tuberculist Genomic Region

12488 CD2-associated protein

Details for - - CD2-associated protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12488

Tuberculist Genomic Region

16969 zinc finger and BTB domain containing 7a

Details for - - zinc finger and BTB domain containing 7a

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16969

Tuberculist Genomic Region

170758 RAS-related C3 botulinum substrate 3

Details for RP23-84C12.18-001 - RAS-related C3 botulinum substrate 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 170758

Tuberculist Genomic Region

17470 CD200 antigen

Details for - - CD200 antigen

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17470

Tuberculist Genomic Region

20469 signal-induced proliferation associated gene 1

Details for - - signal-induced proliferation associated gene 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20469

Tuberculist Genomic Region

21859 tissue inhibitor of metalloproteinase 3

Details for - - tissue inhibitor of metalloproteinase 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 21859

Tuberculist Genomic Region

226412 R3H domain containing 1

Details for - - R3H domain containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 226412

Tuberculist Genomic Region

231830 MICAL-like 2

Details for - - MICAL-like 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 231830

Tuberculist Genomic Region

235315 ring finger protein 214

Details for - - ring finger protein 214

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 235315

Tuberculist Genomic Region

235584 dual specificity phosphatase 7

Details for - - dual specificity phosphatase 7

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 235584

Tuberculist Genomic Region

269941 chondroitin sulfate synthase 1

Details for - - chondroitin sulfate synthase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 269941

Tuberculist Genomic Region

319377 RIKEN cDNA D130012P04 gene

Details for - - RIKEN cDNA D130012P04 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 319377

Tuberculist Genomic Region

319953 tubulin tyrosine ligase-like 1

Details for RP23-10K12.1 - tubulin tyrosine ligase-like 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 319953

Tuberculist Genomic Region

387230 microRNA 99b

Details for - - microRNA 99b

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 387230

Tuberculist Genomic Region

56381 SPEN homolog, transcriptional regulator (Drosophila)

Details for RP23-308N2.11-002 - SPEN homolog, transcriptional regulator (Drosophila)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56381

Tuberculist Genomic Region

70564 family with sequence similarity 213, member A

Details for - - family with sequence similarity 213, member A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 70564

Tuberculist Genomic Region

72472 solute carrier family 16 (monocarboxylic acid transporters), member 10

Details for - - solute carrier family 16 (monocarboxylic acid transporters), member 10

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72472

Tuberculist Genomic Region

72958 zinc finger protein 493

Details for - - zinc finger protein 493

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72958

Tuberculist Genomic Region

74155 ERBB receptor feedback inhibitor 1

Details for RP23-272N19.4 - ERBB receptor feedback inhibitor 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74155

Tuberculist Genomic Region

75202 sperm acrosome associated 6

Details for - - sperm acrosome associated 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 75202

Tuberculist Genomic Region

14123 apolipoprotein C-II

Details for - - apolipoprotein C-II

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11813

Tuberculist Genomic Region

14260 fibrosin

Details for - - fibrosin

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14123

Tuberculist Genomic Region

17127 formin 1

Details for RP23-248J10.1 - formin 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14260

Tuberculist Genomic Region

20544 SMAD family member 3

Details for RP23-63E8.1 - SMAD family member 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17127

Tuberculist Genomic Region

227522 solute carrier family 9 (sodium/hydrogen exchanger), member 1

Details for RP23-32C12.6 - solute carrier family 9 (sodium/hydrogen exchanger), member 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20544

Tuberculist Genomic Region

24045 ribonuclease P/MRP 38 subunit

Details for RP23-167G19.2 - ribonuclease P/MRP 38 subunit

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 227522

Tuberculist Genomic Region

258565 secretory carrier membrane protein 3

Details for - - secretory carrier membrane protein 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 24045

Tuberculist Genomic Region

27212 olfactory receptor 1009

Details for RP23-16D18.13-001 - olfactory receptor 1009

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 258565

Tuberculist Genomic Region

382034 small nucleolar RNA, C/D box 35B

Details for - - small nucleolar RNA, C/D box 35B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 27212

Tuberculist Genomic Region

434394 genetic suppressor element 1

Details for - - genetic suppressor element 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 382034

Tuberculist Genomic Region

665317 ribosomal protein L36 pseudogene

Details for - - ribosomal protein L36 pseudogene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 434394

Tuberculist Genomic Region

667754 component of Sp100-rs pseudogene

Details for - - component of Sp100-rs pseudogene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 665317

Tuberculist Genomic Region

70249 carboxylesterase 2D, pseudogene

Details for - - carboxylesterase 2D, pseudogene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 667754

Tuberculist Genomic Region

78825 RIKEN cDNA 3100002H09 gene

Details for - - RIKEN cDNA 3100002H09 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 70249

Tuberculist Genomic Region

83925 desumoylating isopeptidase 2

Details for - - desumoylating isopeptidase 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 78825

Tuberculist Genomic Region

93691 trichorhinophalangeal syndrome I (human)

Details for - - trichorhinophalangeal syndrome I (human)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 83925

Tuberculist Genomic Region

101023 Kruppel-like factor 7 (ubiquitous)

Details for RP23-23D16.1 - Kruppel-like factor 7 (ubiquitous)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 93691

Tuberculist Genomic Region

108960 zinc finger protein 513

Details for - - zinc finger protein 513

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 101023

Tuberculist Genomic Region

12363 interleukin-1 receptor-associated kinase 2

Details for - - interleukin-1 receptor-associated kinase 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 108960

Tuberculist Genomic Region

320207 caspase 4, apoptosis-related cysteine peptidase

Details for - - caspase 4, apoptosis-related cysteine peptidase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12363

Tuberculist Genomic Region

67154 phosphoinositide-3-kinase, regulatory subunit 5, p101

Details for RP23-432M23.2 - phosphoinositide-3-kinase, regulatory subunit 5, p101

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 320207

Tuberculist Genomic Region

68473 metadherin

Details for - - metadherin

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67154

Tuberculist Genomic Region

77036 MOB kinase activator 1B

Details for - - MOB kinase activator 1B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68473

Tuberculist Genomic Region

18036 RIKEN cDNA 1700109H08 gene

Details for - - RIKEN cDNA 1700109H08 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 77036

Tuberculist Genomic Region

21923 nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, beta

Details for - - nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, beta

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18036

Tuberculist Genomic Region

226562 tenascin C

Details for RP24-144L11.1 - tenascin C

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 21923

Tuberculist Genomic Region

74277 proline-rich coiled-coil 2C

Details for - - proline-rich coiled-coil 2C

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 226562

Tuberculist Genomic Region

19271 cysteine-rich hydrophobic domain 2

Details for - - cysteine-rich hydrophobic domain 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74277

Tuberculist Genomic Region

Details for RP24-113P16.2 - protein tyrosine phosphatase, receptor type, J

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19271

Tuberculist Genomic Region

TFs percTargets pValue
V_FKLF_Q5_M01837 0.904762 0.0000138
Displaying 1 - 1 of 1
GO Terms
NA
Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
0.94 GCGCCG E2F3.2, E2F2.2, E2F3.1, E2F2.1 1.05 CGAGCCAC NA
Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.41 CGGTAT NA NA 0.57 ACNCGAGC NA NA

3p UTR PITA

miRNAs percTargets pValue
mmu-miR-296-5p 0.645161 0.0000101
miRNAs percTargets pValue
NA
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