PITA_78 megaCluster: 11 Residual: 0.13

Summary

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
PITA_78 11 0.13 15 0 0.970479 0

Members

Displaying 1 - 41 of 41
108907 nucleolar and spindle associated protein 1

Details for RP23-22A15.4 - nucleolar and spindle associated protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 108907

Tuberculist Genomic Region

110460 acetyl-Coenzyme A acetyltransferase 2

Details for - - acetyl-Coenzyme A acetyltransferase 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 110460

Tuberculist Genomic Region

16880 leukemia inhibitory factor receptor

Details for - - leukemia inhibitory factor receptor

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16880

Tuberculist Genomic Region

19362 RAD51 associated protein 1

Details for - - RAD51 associated protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19362

Tuberculist Genomic Region

208836 Fanconi anemia, complementation group I

Details for - - Fanconi anemia, complementation group I

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 208836

Tuberculist Genomic Region

214901 CTF18, chromosome transmission fidelity factor 18

Details for - - CTF18, chromosome transmission fidelity factor 18

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 214901

Tuberculist Genomic Region

387175 microRNA 15b

Details for - - microRNA 15b

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 387175

Tuberculist Genomic Region

404710 IQ motif containing GTPase activating protein 3

Details for - - IQ motif containing GTPase activating protein 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 404710

Tuberculist Genomic Region

51944 kinetochore-localized astrin/SPAG5 binding

Details for RP23-172B16.7 - kinetochore-localized astrin/SPAG5 binding

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 51944

Tuberculist Genomic Region

66949 tripartite motif-containing 59

Details for - - tripartite motif-containing 59

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66949

Tuberculist Genomic Region

66977 NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)

Details for - - NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66977

Tuberculist Genomic Region

68014 zwilch kinetochore protein

Details for - - zwilch kinetochore protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68014

Tuberculist Genomic Region

70645 Opa interacting protein 5

Details for RP23-22A15.3 - Opa interacting protein 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 70645

Tuberculist Genomic Region

72415 shugoshin-like 1 (S. pombe)

Details for - - shugoshin-like 1 (S. pombe)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72415

Tuberculist Genomic Region

110074 deoxyuridine triphosphatase

Details for RP23-216B20.3 - deoxyuridine triphosphatase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 110074

Tuberculist Genomic Region

19361 RAD51 homolog

Details for RP23-15I21.4 - RAD51 homolog

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19361

Tuberculist Genomic Region

234258 nei like 3 (E. coli)

Details for - - nei like 3 (E. coli)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 234258

Tuberculist Genomic Region

237211 Fanconi anemia, complementation group B

Details for RP23-132J17.2 - Fanconi anemia, complementation group B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 237211

Tuberculist Genomic Region

69706 leucine rich repeat protein 1

Details for - - leucine rich repeat protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69706

Tuberculist Genomic Region

70466 cytoskeleton associated protein 2-like

Details for RP23-160G19.6 - cytoskeleton associated protein 2-like

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 70466

Tuberculist Genomic Region

78733 trophinin associated protein

Details for - - trophinin associated protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 78733

Tuberculist Genomic Region

12236 budding uninhibited by benzimidazoles 1 homolog, beta (S. cerevisiae)

Details for RP23-204G5.1 - budding uninhibited by benzimidazoles 1 homolog, beta (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12236

Tuberculist Genomic Region

16551 kinesin family member 11

Details for - - kinesin family member 11

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16551

Tuberculist Genomic Region

19366 RAD54 like (S. cerevisiae)

Details for RP23-383D12.1 - RAD54 like (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19366

Tuberculist Genomic Region

20419 Shc SH2-domain binding protein 1

Details for - - Shc SH2-domain binding protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20419

Tuberculist Genomic Region

209737 kinesin family member 15

Details for - - kinesin family member 15

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 209737

Tuberculist Genomic Region

219114 spindle and kinetochore associated complex subunit 3

Details for - - spindle and kinetochore associated complex subunit 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 219114

Tuberculist Genomic Region

233406 protein regulator of cytokinesis 1

Details for - - protein regulator of cytokinesis 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 233406

Tuberculist Genomic Region

54392 non-SMC condensin I complex, subunit G

Details for - - non-SMC condensin I complex, subunit G

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 54392

Tuberculist Genomic Region

66934 DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)

Details for RP23-430P1.2 - DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66934

Tuberculist Genomic Region

68298 non-SMC condensin I complex, subunit D2

Details for - - non-SMC condensin I complex, subunit D2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68298

Tuberculist Genomic Region

108912 cell division cycle associated 2

Details for - - cell division cycle associated 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 108912

Tuberculist Genomic Region

12449 cyclin F

Details for - - cyclin F

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12449

Tuberculist Genomic Region

12704 citron

Details for - - citron

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12704

Tuberculist Genomic Region

14793 cell division cycle associated 3

Details for - - cell division cycle associated 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14793

Tuberculist Genomic Region

15366 hyaluronan mediated motility receptor (RHAMM)

Details for RP23-382C18.3 - hyaluronan mediated motility receptor (RHAMM)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15366

Tuberculist Genomic Region

18817 polo-like kinase 1

Details for - - polo-like kinase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18817

Tuberculist Genomic Region

208628 kinetochore associated 1

Details for - - kinetochore associated 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 208628

Tuberculist Genomic Region

209334 Gen homolog 1, endonuclease (Drosophila)

Details for - - Gen homolog 1, endonuclease (Drosophila)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 209334

Tuberculist Genomic Region

54141 sperm associated antigen 5

Details for RP23-185A18.13-001 - sperm associated antigen 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 54141

Tuberculist Genomic Region

623474 RAD54 homolog B (S. cerevisiae)

Details for RP23-242O9.3 - RAD54 homolog B (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 623474

Tuberculist Genomic Region

TFBS DB TF

TFs percTargets pValue
POU4F1_POU_DBD_monomeric_14_1 0.15 0.00000613

GO Terms

Displaying 1 - 1 of 1
GO Terms
NA

Upstream MEME Motif

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
0.000068 ARAAAAAMNAAA NA 0.39 ARATTTGAAWY NA

Upstream Weeder Motif

Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
1.44 CGCGAT NA 1.53 TCCCGCGA NA

3p UTR Weeder

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
NA NA NA NA NA NA

3p UTR PITA

miRNAs percTargets pValue
NA

3p UTR TargetScan

miRNAs percTargets pValue
NA

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