TargetScan_173 megaCluster: 11 Residual: 0.13 | Macrophage Network Portal

Summary

Title	Cluster	Residual	Bicluster Conditions	Residual Permutation P-Value	Var. Exp. First PC	Var. Exp. First PC Perm. P-Value
TargetScan_173	11	0.13	15	0	0.97332	0

Members

Displaying 1 - 20 of 20

21770 protein phosphatase 2, regulatory subunit B', delta Details for - - protein phosphatase 2, regulatory subunit B', delta GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 21770 Tuberculist Genomic Region	235281 sodium channel, voltage-gated, type III, beta Details for - - sodium channel, voltage-gated, type III, beta GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 235281 Tuberculist Genomic Region
245670 Ras-related GTP binding B Details for RP23-180D16.3 - Ras-related GTP binding B GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 245670 Tuberculist Genomic Region	66258 mitochondrial ribosomal protein S17 Details for - - mitochondrial ribosomal protein S17 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66258 Tuberculist Genomic Region
67452 patatin-like phospholipase domain containing 8 Details for - - patatin-like phospholipase domain containing 8 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 67452 Tuberculist Genomic Region	11532 guanosine monophosphate reductase 2 Details for - - guanosine monophosphate reductase 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 105446 Tuberculist Genomic Region
11949 alcohol dehydrogenase 5 (class III), chi polypeptide Details for - - alcohol dehydrogenase 5 (class III), chi polypeptide GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 11532 Tuberculist Genomic Region	12039 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 Details for RP23-119N4.1 - ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 11949 Tuberculist Genomic Region
18634 branched chain ketoacid dehydrogenase E1, alpha polypeptide Details for - - branched chain ketoacid dehydrogenase E1, alpha polypeptide GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12039 Tuberculist Genomic Region	211986 peroxisomal biogenesis factor 7 Details for - - peroxisomal biogenesis factor 7 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 18634 Tuberculist Genomic Region
227197 transmembrane protein 18 Details for - - transmembrane protein 18 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 211986 Tuberculist Genomic Region	28030 NADH dehydrogenase (ubiquinone) Fe-S protein 1 Details for - - NADH dehydrogenase (ubiquinone) Fe-S protein 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 227197 Tuberculist Genomic Region
320204 G elongation factor, mitochondrial 1 Details for - - G elongation factor, mitochondrial 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 28030 Tuberculist Genomic Region	56453 methyltransferase like 20 Details for RP23-355N5.5 - methyltransferase like 20 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 320204 Tuberculist Genomic Region
56794 membrane-bound transcription factor peptidase, site 1 Details for - - membrane-bound transcription factor peptidase, site 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 56453 Tuberculist Genomic Region	58193 2-hydroxyacyl-CoA lyase 1 Details for - - 2-hydroxyacyl-CoA lyase 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 56794 Tuberculist Genomic Region
66335 exostoses (multiple)-like 2 Details for - - exostoses (multiple)-like 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 58193 Tuberculist Genomic Region	68839 ATPase, H+ transporting, lysosomal V1 subunit C1 Details for - - ATPase, H+ transporting, lysosomal V1 subunit C1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66335 Tuberculist Genomic Region
78255 ankyrin repeat domain 46 Details for - - ankyrin repeat domain 46 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 68839 Tuberculist Genomic Region	Details for - - Ral GEF with PH domain and SH3 binding motif 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 78255 Tuberculist Genomic Region

TFBS DB TF

TFs	percTargets	pValue
V_HOXC11_01_M01329	0.15	0.000015

GO Terms

Displaying 1 - 1 of 1

GO Terms
NA

Upstream MEME Motif

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif2 E-Value	Motif2 Consensus	Motif2 Matches
18	WARAAAAANAAC	NA	4400	TTTAWAWTWAT	NA

Upstream Weeder Motif

Motif1 Score	Motif1 Consensus	Motif1 Matches	Motif2 Score	Motif2 Consensus	Motif2 Matches
1.43	CCGCGT	NA	1.7	CCGCGNNC	NA

3p UTR Weeder

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif1 Model	Motif2 E-Value	Motif2 Consensus	Motif2 Matches	Motif2 Model
0.66	AGTGCT	NA	NA	0.85	TAGGATTT	NA	NA

3p UTR PITA

miRNAs	percTargets	pValue
NA

3p UTR TargetScan

miRNAs	percTargets	pValue
mmu-miR-466m-3p	0.5	0.0000321

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