TargetScan_220 megaCluster: 1 Residual: 0.30

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
TargetScan_220 1 0.30 13 0 0.80913 0
Displaying 1 - 43 of 43
21426 sphingomyelin synthase 1

Details for - - sphingomyelin synthase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 208449

Tuberculist Genomic Region

52398 transcription factor EC

Details for - - transcription factor EC

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 21426

Tuberculist Genomic Region

78103 septin 11

Details for - - septin 11

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 52398

Tuberculist Genomic Region

100504215 RIKEN cDNA 8430431K14 gene

Details for - - RIKEN cDNA 8430431K14 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 78103

Tuberculist Genomic Region

11433 predicted gene, 20115

Details for - - predicted gene, 20115

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100504215

Tuberculist Genomic Region

12983 integrin alpha 9

Details for - - integrin alpha 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 104099

Tuberculist Genomic Region

14191 acid phosphatase 5, tartrate resistant

Details for - - acid phosphatase 5, tartrate resistant

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11433

Tuberculist Genomic Region

16001 colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)

Details for - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12983

Tuberculist Genomic Region

16477 Gardner-Rasheed feline sarcoma viral (Fgr) oncogene homolog

Details for RP23-125F21.1 - Gardner-Rasheed feline sarcoma viral (Fgr) oncogene homolog

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14191

Tuberculist Genomic Region

17872 insulin-like growth factor I receptor

Details for - - insulin-like growth factor I receptor

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16001

Tuberculist Genomic Region

19157 jun B proto-oncogene

Details for - - jun B proto-oncogene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16477

Tuberculist Genomic Region

217069 protein phosphatase 1, regulatory (inhibitor) subunit 15A

Details for - - protein phosphatase 1, regulatory (inhibitor) subunit 15A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17872

Tuberculist Genomic Region

21938 cytohesin 1

Details for RP23-28C17.3 - cytohesin 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19157

Tuberculist Genomic Region

22337 tripartite motif-containing 25

Details for RP23-176J13.7 - tripartite motif-containing 25

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 217069

Tuberculist Genomic Region

22350 tumor necrosis factor receptor superfamily, member 1b

Details for RP23-157J11.1 - tumor necrosis factor receptor superfamily, member 1b

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 21938

Tuberculist Genomic Region

229694 vitamin D receptor

Details for - - vitamin D receptor

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 22337

Tuberculist Genomic Region

237887 ezrin

Details for - - ezrin

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 22350

Tuberculist Genomic Region

319487 expressed sequence AI504432

Details for - - expressed sequence AI504432

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 229694

Tuberculist Genomic Region

433926 schlafen 10, pseudogene

Details for - - schlafen 10, pseudogene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 237887

Tuberculist Genomic Region

56209 RIKEN cDNA A230028O05 gene

Details for - - RIKEN cDNA A230028O05 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 319487

Tuberculist Genomic Region

56715 leucine rich repeat containing 8 family, member B

Details for - - leucine rich repeat containing 8 family, member B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 433926

Tuberculist Genomic Region

627939 glycerophosphodiester phosphodiesterase 1

Details for - - glycerophosphodiester phosphodiesterase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56209

Tuberculist Genomic Region

666730 RAB guanine nucleotide exchange factor (GEF) 1

Details for - - RAB guanine nucleotide exchange factor (GEF) 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56715

Tuberculist Genomic Region

66878 ribosomal protein L21 pseudogene

Details for - - ribosomal protein L21 pseudogene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 627939

Tuberculist Genomic Region

71795 zinc finger, ZZ domain containing 3 pseudogene

Details for - - zinc finger, ZZ domain containing 3 pseudogene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 666730

Tuberculist Genomic Region

72747 RIO kinase 3

Details for - - RIO kinase 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66878

Tuberculist Genomic Region

12702 phosphatidylinositol transfer protein, cytoplasmic 1

Details for RP23-317F9.8 - phosphatidylinositol transfer protein, cytoplasmic 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 71795

Tuberculist Genomic Region

16176 tetratricopeptide repeat domain 39C

Details for - - tetratricopeptide repeat domain 39C

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72747

Tuberculist Genomic Region

18033 suppressor of cytokine signaling 3

Details for RP23-268N22.6 - suppressor of cytokine signaling 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12702

Tuberculist Genomic Region

207728 interleukin 1 beta

Details for RP23-384K11.2 - interleukin 1 beta

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16176

Tuberculist Genomic Region

21817 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105

Details for - - nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18033

Tuberculist Genomic Region

16452 phosphodiesterase 2A, cGMP-stimulated

Details for - - phosphodiesterase 2A, cGMP-stimulated

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 207728

Tuberculist Genomic Region

18550 transglutaminase 2, C polypeptide

Details for RP23-396G1.2 - transglutaminase 2, C polypeptide

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 21817

Tuberculist Genomic Region

216799 Janus kinase 2

Details for - - Janus kinase 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16452

Tuberculist Genomic Region

60406 furin (paired basic amino acid cleaving enzyme)

Details for - - furin (paired basic amino acid cleaving enzyme)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18550

Tuberculist Genomic Region

65112 NLR family, pyrin domain containing 3

Details for RP23-210M6.4 - NLR family, pyrin domain containing 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 216799

Tuberculist Genomic Region

17857 sin3 associated polypeptide

Details for - - sin3 associated polypeptide

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 60406

Tuberculist Genomic Region

17858 prostate transmembrane protein, androgen induced 1

Details for RP23-412O4.1 - prostate transmembrane protein, androgen induced 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 65112

Tuberculist Genomic Region

68732 myxovirus (influenza virus) resistance 1

Details for - - myxovirus (influenza virus) resistance 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17857

Tuberculist Genomic Region

74646 myxovirus (influenza virus) resistance 2

Details for - - myxovirus (influenza virus) resistance 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17858

Tuberculist Genomic Region

12515 leucine rich repeat containing 16A

Details for RP23-462P2.7 - leucine rich repeat containing 16A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68732

Tuberculist Genomic Region

Details for RP23-169H13.1 - splA/ryanodine receptor domain and SOCS box containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74646

Tuberculist Genomic Region

Details for - - CD69 antigen

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12515

Tuberculist Genomic Region

TFs percTargets pValue
V_T3RBETA_Q6_01_M02119 0.861111 0.000000875
Displaying 1 - 1 of 1
GO Terms
NA
Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
1.09 GACGCG NA 1.16 CCGCAGCT
Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.65 GTCNCT NA NA 0.72 GGTCNCTC NA NA

3p UTR PITA

miRNAs percTargets pValue
mmu-miR-673-3p 0.5625 0.000015
miRNAs percTargets pValue
mmu-miR-331-3p 0.46875 0.00000449
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