TargetScan_30 megaCluster: 1 Residual: 1.60

Summary

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
TargetScan_30 1 1.60 9 1 0.762595 0.072

Members

Displaying 1 - 34 of 34
12703 suppressor of cytokine signaling 1

Details for - - suppressor of cytokine signaling 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12703

Tuberculist Genomic Region

14173 fibroblast growth factor 2

Details for DN-452A22.6 - fibroblast growth factor 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14173

Tuberculist Genomic Region

14706 guanine nucleotide binding protein (G protein), gamma 4

Details for - - guanine nucleotide binding protein (G protein), gamma 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14706

Tuberculist Genomic Region

16169 interleukin 15 receptor, alpha chain

Details for RP23-114B13.4 - interleukin 15 receptor, alpha chain

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16169

Tuberculist Genomic Region

16656 human immunodeficiency virus type I enhancer binding protein 3

Details for RP23-98J9.1 - human immunodeficiency virus type I enhancer binding protein 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16656

Tuberculist Genomic Region

17095 lymphoblastomic leukemia 1

Details for - - lymphoblastomic leukemia 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17095

Tuberculist Genomic Region

18755 protein kinase C, eta

Details for - - protein kinase C, eta

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18755

Tuberculist Genomic Region

192656 receptor (TNFRSF)-interacting serine-threonine kinase 2

Details for RP23-378L22.1 - receptor (TNFRSF)-interacting serine-threonine kinase 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 192656

Tuberculist Genomic Region

209590 interleukin 23 receptor

Details for - - interleukin 23 receptor

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 209590

Tuberculist Genomic Region

213783 pleckstrin homology domain containing, family G (with RhoGef domain) member 1

Details for - - pleckstrin homology domain containing, family G (with RhoGef domain) member 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 213783

Tuberculist Genomic Region

216850 KDM1 lysine (K)-specific demethylase 6B

Details for RP23-5O23.5 - KDM1 lysine (K)-specific demethylase 6B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 216850

Tuberculist Genomic Region

227659 solute carrier family 2 (facilitated glucose transporter), member 6

Details for RP23-449M10.2 - solute carrier family 2 (facilitated glucose transporter), member 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 227659

Tuberculist Genomic Region

232889 phospholipase A2, group IVC (cytosolic, calcium-independent)

Details for - - phospholipase A2, group IVC (cytosolic, calcium-independent)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 232889

Tuberculist Genomic Region

235587 poly (ADP-ribose) polymerase family, member 3

Details for - - poly (ADP-ribose) polymerase family, member 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 235587

Tuberculist Genomic Region

246779 interleukin 27

Details for - - interleukin 27

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 246779

Tuberculist Genomic Region

269356 solute carrier family 4, sodium bicarbonate transporter-like, member 11

Details for - - solute carrier family 4, sodium bicarbonate transporter-like, member 11

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 269356

Tuberculist Genomic Region

381810 lysophosphatidic acid receptor 5

Details for - - lysophosphatidic acid receptor 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 381810

Tuberculist Genomic Region

434204 WAS protein homolog associated with actin, golgi membranes and microtubules

Details for - - WAS protein homolog associated with actin, golgi membranes and microtubules

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 434204

Tuberculist Genomic Region

54720 regulator of calcineurin 1

Details for - - regulator of calcineurin 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 54720

Tuberculist Genomic Region

59031 carbohydrate sulfotransferase 12

Details for - - carbohydrate sulfotransferase 12

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 59031

Tuberculist Genomic Region

629303 predicted gene 11435

Details for RP23-320E6.1 - predicted gene 11435

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 629303

Tuberculist Genomic Region

69660 transmembrane BAX inhibitor motif containing 1

Details for - - transmembrane BAX inhibitor motif containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69660

Tuberculist Genomic Region

72203 RIKEN cDNA 2610507I01 gene

Details for - - RIKEN cDNA 2610507I01 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72203

Tuberculist Genomic Region

74123 forkhead box P4

Details for - - forkhead box P4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74123

Tuberculist Genomic Region

76187 alcohol dehydrogenase, iron containing, 1

Details for - - alcohol dehydrogenase, iron containing, 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 76187

Tuberculist Genomic Region

26404 mitogen-activated protein kinase kinase kinase 12

Details for - - mitogen-activated protein kinase kinase kinase 12

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 26404

Tuberculist Genomic Region

320910 integrin beta 8

Details for - - integrin beta 8

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 320910

Tuberculist Genomic Region

66895 PX domain containing 1

Details for - - PX domain containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66895

Tuberculist Genomic Region

67865 regulator of G-protein signalling 10

Details for - - regulator of G-protein signalling 10

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67865

Tuberculist Genomic Region

78103 RIKEN cDNA 8430431K14 gene

Details for - - RIKEN cDNA 8430431K14 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 78103

Tuberculist Genomic Region

16452 Janus kinase 2

Details for - - Janus kinase 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16452

Tuberculist Genomic Region

18035 nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha

Details for - - nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18035

Tuberculist Genomic Region

277414 transformation related protein 53 inducible protein 11

Details for RP23-217C12.1 - transformation related protein 53 inducible protein 11

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 277414

Tuberculist Genomic Region

381560 X Kell blood group precursor related family member 8 homolog

Details for RP23-442A20.2 - X Kell blood group precursor related family member 8 homolog

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 381560

Tuberculist Genomic Region

TFBS DB TF

TFs percTargets pValue
V_ZIC2_01_M00449 0.5 0.0000168

GO Terms

Displaying 1 - 1 of 1
GO Terms
NA

Upstream MEME Motif

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
0.18 AAAARANAAAAA NA 1300 ACTTTCAGNRWT NA

Upstream Weeder Motif

Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
0.99 AGCCGC NA 1.24 GGAGCCCG NA

3p UTR Weeder

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.7 TCGGCG NA NA 0.88 ACNCCGTC NA NA

3p UTR PITA

miRNAs percTargets pValue
NA

3p UTR TargetScan

miRNAs percTargets pValue
mmu-miR-3064-3p 0.481481 0.0000318

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