TargetScan_63 megaCluster: 4 Residual: 0.12 | Macrophage Network Portal

Summary

Title	Cluster	Residual	Bicluster Conditions	Residual Permutation P-Value	Var. Exp. First PC	Var. Exp. First PC Perm. P-Value
TargetScan_63	4	0.12	15	0	0.976374	0

Members

Displaying 1 - 19 of 19

12042 B cell leukemia/lymphoma 10 Details for - - B cell leukemia/lymphoma 10 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12042 Tuberculist Genomic Region	13000 casein kinase 2, alpha prime polypeptide Details for - - casein kinase 2, alpha prime polypeptide GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 13000 Tuberculist Genomic Region
18689 per-hexamer repeat gene 4 Details for - - per-hexamer repeat gene 4 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 18689 Tuberculist Genomic Region	18787 serine (or cysteine) peptidase inhibitor, clade E, member 1 Details for - - serine (or cysteine) peptidase inhibitor, clade E, member 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 18787 Tuberculist Genomic Region
192657 elongation factor RNA polymerase II 2 Details for - - elongation factor RNA polymerase II 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 192657 Tuberculist Genomic Region	21353 TRAF family member-associated Nf-kappa B activator Details for RP23-1O11.1 - TRAF family member-associated Nf-kappa B activator GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 21353 Tuberculist Genomic Region
225929 protein associated with topoisomerase II homolog 1 (yeast) Details for - - protein associated with topoisomerase II homolog 1 (yeast) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 225929 Tuberculist Genomic Region	67154 metadherin Details for - - metadherin GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 67154 Tuberculist Genomic Region
100502606 predicted gene, 19279 Details for - - predicted gene, 19279 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 100502606 Tuberculist Genomic Region	102857 solute carrier family 6 (neurotransmitter transporter, creatine), member 8 Details for RP23-329M9.4 - solute carrier family 6 (neurotransmitter transporter, creatine), member 8 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 102857 Tuberculist Genomic Region
109754 cytochrome b5 reductase 3 Details for - - cytochrome b5 reductase 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 109754 Tuberculist Genomic Region	114644 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 Details for RP23-395E18.3 - solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 114644 Tuberculist Genomic Region
15959 interferon-induced protein with tetratricopeptide repeats 3 Details for - - interferon-induced protein with tetratricopeptide repeats 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 15959 Tuberculist Genomic Region	17931 protein phosphatase 1, regulatory (inhibitor) subunit 12A Details for - - protein phosphatase 1, regulatory (inhibitor) subunit 12A GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 17931 Tuberculist Genomic Region
18036 nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, beta Details for - - nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, beta GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 18036 Tuberculist Genomic Region	231713 N(alpha)-acetyltransferase 25, NatB auxiliary subunit Details for - - N(alpha)-acetyltransferase 25, NatB auxiliary subunit GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 231713 Tuberculist Genomic Region
641340 nuclear receptor binding factor 2 Details for - - nuclear receptor binding factor 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 641340 Tuberculist Genomic Region	66102 chemokine (C-X-C motif) ligand 16 Details for DN-491F10.6 - chemokine (C-X-C motif) ligand 16 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66102 Tuberculist Genomic Region
75345 SLAM family member 7 Details for - - SLAM family member 7 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 75345 Tuberculist Genomic Region

TFBS DB TF

TFs	percTargets	pValue
V_SP1_Q2_01_M00933	1	0

GO Terms

Displaying 1 - 1 of 1

GO Terms
NA

Upstream MEME Motif

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif2 E-Value	Motif2 Consensus	Motif2 Matches
45	AAGGGAGGAGGA	NA	260	CTTTYTTTKAA	NA

Upstream Weeder Motif

Motif1 Score	Motif1 Consensus	Motif1 Matches	Motif2 Score	Motif2 Consensus	Motif2 Matches
1.34	CCGACG	NA	1.65	GGGNCGCG	NA

3p UTR Weeder

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif1 Model	Motif2 E-Value	Motif2 Consensus	Motif2 Matches	Motif2 Model
0.7	CCTAGC	NA	NA	1.06	TAGCCNTA	NA	NA

3p UTR PITA

miRNAs	percTargets	pValue
NA

3p UTR TargetScan

miRNAs	percTargets	pValue
NA

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