TargetScan_93 megaCluster: 11 Residual: 0.19 | Macrophage Network Portal

Summary

Title	Cluster	Residual	Bicluster Conditions	Residual Permutation P-Value	Var. Exp. First PC	Var. Exp. First PC Perm. P-Value
TargetScan_93	11	0.19	15	0	0.926222	0

Members

Displaying 1 - 36 of 36

100233175 cDNA sequence AK010878 Details for - - cDNA sequence AK010878 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 100233175 Tuberculist Genomic Region	110391 quinoid dihydropteridine reductase Details for - - quinoid dihydropteridine reductase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 110391 Tuberculist Genomic Region
12237 budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae) Details for - - budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12237 Tuberculist Genomic Region	15468 protein arginine N-methyltransferase 2 Details for - - protein arginine N-methyltransferase 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 15468 Tuberculist Genomic Region
17149 mago-nashi homolog, proliferation-associated (Drosophila) Details for RP23-40G2.2 - mago-nashi homolog, proliferation-associated (Drosophila) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 17149 Tuberculist Genomic Region	18002 neural precursor cell expressed, developmentally down-regulated gene 8 Details for - - neural precursor cell expressed, developmentally down-regulated gene 8 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 18002 Tuberculist Genomic Region
20196 S100 calcium binding protein A13 Details for - - S100 calcium binding protein A13 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 20196 Tuberculist Genomic Region	232679 zinc finger, C3HC type 1 Details for - - zinc finger, C3HC type 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 232679 Tuberculist Genomic Region
28030 G elongation factor, mitochondrial 1 Details for - - G elongation factor, mitochondrial 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 28030 Tuberculist Genomic Region	50911 exosome component 9 Details for - - exosome component 9 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 50911 Tuberculist Genomic Region
53861 zinc finger, RAN-binding domain containing 2 Details for - - zinc finger, RAN-binding domain containing 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 53861 Tuberculist Genomic Region	54638 coiled-coil domain containing 22 Details for - - coiled-coil domain containing 22 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 54638 Tuberculist Genomic Region
56451 succinate-CoA ligase, GDP-forming, alpha subunit Details for - - succinate-CoA ligase, GDP-forming, alpha subunit GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 56451 Tuberculist Genomic Region	65103 ADP-ribosylation factor-like 6 interacting protein 6 Details for RP23-265N10.1 - ADP-ribosylation factor-like 6 interacting protein 6 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 65103 Tuberculist Genomic Region
66162 bolA-like 2 (E. coli) Details for - - bolA-like 2 (E. coli) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66162 Tuberculist Genomic Region	66191 immediate early response 3 interacting protein 1 Details for - - immediate early response 3 interacting protein 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66191 Tuberculist Genomic Region
66411 tubulin folding cofactor B Details for - - tubulin folding cofactor B GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66411 Tuberculist Genomic Region	67139 MIS12 homolog (yeast) Details for DN-393H17.5 - MIS12 homolog (yeast) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 67139 Tuberculist Genomic Region
67151 proteasome (prosome, macropain) 26S subunit, non-ATPase, 9 Details for - - proteasome (prosome, macropain) 26S subunit, non-ATPase, 9 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 67151 Tuberculist Genomic Region	67707 mitochondrial ribosomal protein L24 Details for - - mitochondrial ribosomal protein L24 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 67707 Tuberculist Genomic Region
68202 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 Details for - - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 68202 Tuberculist Genomic Region	69957 CDC16 cell division cycle 16 Details for - - CDC16 cell division cycle 16 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 69957 Tuberculist Genomic Region
70998 PHD finger protein 6 Details for - - PHD finger protein 6 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 70998 Tuberculist Genomic Region	71609 TNFRSF1A-associated via death domain Details for - - TNFRSF1A-associated via death domain GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 71609 Tuberculist Genomic Region
71968 WD repeat domain 73 Details for - - WD repeat domain 73 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 71968 Tuberculist Genomic Region	72569 Bardet-Biedl syndrome 5 (human) Details for RP23-436E15.1 - Bardet-Biedl syndrome 5 (human) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 72569 Tuberculist Genomic Region
80280 CDK5 regulatory subunit associated protein 3 Details for RP23-353J21.7 - CDK5 regulatory subunit associated protein 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 80280 Tuberculist Genomic Region	28106 DNA segment, Chr 17, Wayne State University 104, expressed Details for - - DNA segment, Chr 17, Wayne State University 104, expressed GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 28106 Tuberculist Genomic Region
58911 sulfatase modifying factor 1 Details for - - sulfatase modifying factor 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 58911 Tuberculist Genomic Region	66447 microsomal glutathione S-transferase 3 Details for - - microsomal glutathione S-transferase 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66447 Tuberculist Genomic Region
664994 isochorismatase domain containing 2a Details for - - isochorismatase domain containing 2a GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 664994 Tuberculist Genomic Region	68776 TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor Details for RP24-258K7.3 - TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 68776 Tuberculist Genomic Region
72042 coactosin-like 1 (Dictyostelium) Details for - - coactosin-like 1 (Dictyostelium) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 72042 Tuberculist Genomic Region	11532 alcohol dehydrogenase 5 (class III), chi polypeptide Details for - - alcohol dehydrogenase 5 (class III), chi polypeptide GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 11532 Tuberculist Genomic Region
20014 ribophorin II Details for RP23-163J20.6 - ribophorin II GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 20014 Tuberculist Genomic Region	70536 glutaminyl-peptide cyclotransferase (glutaminyl cyclase) Details for - - glutaminyl-peptide cyclotransferase (glutaminyl cyclase) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 70536 Tuberculist Genomic Region

TFBS DB TF

TFs	percTargets	pValue
GABPA_MA0062.2	0.5	0.0000278

GO Terms

Displaying 1 - 1 of 1

GO Terms
NA

Upstream MEME Motif

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif2 E-Value	Motif2 Consensus	Motif2 Matches
0.00012	AAWAAAACAAA	NA	250	AASAWTTTAAAA	NA

Upstream Weeder Motif

Motif1 Score	Motif1 Consensus	Motif1 Matches	Motif2 Score	Motif2 Consensus	Motif2 Matches
1.26	GCGGAA	NA	1.32	GCGCGGAA	NA

3p UTR Weeder

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif1 Model	Motif2 E-Value	Motif2 Consensus	Motif2 Matches	Motif2 Model
0.49	GCGATA	NA	NA	0.65	TCATNNTG	NA	NA

3p UTR PITA

miRNAs	percTargets	pValue
NA

3p UTR TargetScan

miRNAs	percTargets	pValue
NA

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