GO:0006259

DNA metabolic process

Details: 
Any cellular metabolic process involving deoxyribonucleic acid. This is one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides. [ISBN:0198506732]
Evidence Code: 
IDA

TargetScan_95

Mega Cluster: 
11
Residual: 
0.11
Up.MEME Motif1 Matches: 
Klf4_MA0039.2
SP1_MA0079.2
V$SP4_Q5_M01273
V$SP1_Q6_M00196
V$SP1_Q4_01_M00932
V$SP1_Q6_01_M00931
V$GC_01_M00255
V$SP1_Q2_01_M00933
V$SP2_01_M01783
V$KLF7_03_M02773
V$GKLF_02_M01588
V$SP1_02_M01303
V$SP1_03_M02281
V$SP4_03_M02810
V$ZBP89_Q4_M01816
V$CKROX_Q2_M01175
V$MAZ_Q6_01_M02023
V$SMAD4_04_M02898
V$MAZR_01_M00491
V$UF1H3BETA_Q6_M01068
V$E2F3_Q6_M02089
V$KROX_Q6_M00982
V$ZFP281_04_M02831
V$EGR1_06_M02744
V$SP1_01_M00008
V$ZFP281_01_M01597
V$ZFP740_03_M02834
V$EGR1_Q6_M01873
V$MAZ_Q6_M00649
V$FKLF_Q5_M01837
V$BCL6B_04_M02844
V$EGR_Q6_M00807
V$SP1SP3_Q4_M01219
V$ETF_Q6_M00695
V$ZNF219_01_M01122
V$ZFP410_04_M02936
V$SP4_04_M02914
V$WT1_Q6_01_M02036
V$CACD_01_M01113
Klf7.1
Sp4.1
Smad3.1
Egr1.1
Zfp281.2
Zfp740.1
Bcl6b.2
Zfp410.1
Sp4.2
Zif268.1
Klf7.2
SP1_C2H2_DBD_monomeric_11_1
SP4_C2H2_full_monomeric_17_1
KLF14_C2H2_DBD_monomeric_14_1
SP3_C2H2_DBD_monomeric_11_1
KLF16_C2H2_DBD_monomeric_11_1
SP8_C2H2_DBD_monomeric_12_1
KLF13_C2H2_full_monomeric_18_1
ZNF740_C2H2_full_monomeric_10_1
Klf12_C2H2_DBD_monomeric_15_1
Egr1_C2H2_mouse-DBD_mutant_DBD_monomeric_16_1
Zfp740_C2H2_DBD_monomeric_10_1
Up.WEEDER Motif1 Matches: 
NA

TargetScan_47

Mega Cluster: 
11
Residual: 
0.20
Up.MEME Motif1 Matches: 
Foxd3_MA0041.1
Zfp105.1
Up.WEEDER Motif1 Matches: 
NA

TargetScan_31

Mega Cluster: 
10
Residual: 
0.16
Up.MEME Motif1 Matches: 
NA
Up.WEEDER Motif1 Matches: 
V$SMAD4_04_M02898
Smad3.1
E2F8_E2F_DBD_dimeric_12_1
YY2_C2H2_full_dimeric_12_1

TargetScan_195

Mega Cluster: 
10
Residual: 
0.19
Up.MEME Motif1 Matches: 
NA
Up.WEEDER Motif1 Matches: 
Zfp161.2
Max.2

TargetScan_115

Mega Cluster: 
10
Residual: 
0.14
Up.MEME Motif1 Matches: 
NA
Up.WEEDER Motif1 Matches: 
NA

PITA_78

Mega Cluster: 
11
Residual: 
0.13
Up.MEME Motif1 Matches: 
NA
Up.WEEDER Motif1 Matches: 
NA

PITA_4

Mega Cluster: 
11
Residual: 
0.13
Up.MEME Motif1 Matches: 
NA
Up.WEEDER Motif1 Matches: 
V$E2F1_Q6_01_M00940
V$E2F_01_M00024
V$E2F_Q6_M00427
V$E2F_Q4_02_M00939
V$E2F_Q3_01_M00918
V$E2F1_Q6_M00431
V$E2F_Q3_M00425
V$E2F_Q4_M00426
V$E2F4DP1_01_M00738
V$E2F_Q4_01_M00919
V$E2F_02_M00050
V$E2F_03_M00516
V$E2F_Q6_01_M00920
V$E2F1DP1RB_01_M00740
V$E2F4DP2_01_M00739
V$E2F1_Q4_M00430
V$E2F1DP1_01_M00736
V$E2F1_Q3_01_M00938
V$E2F1DP2_01_M00737

PITA_27

Mega Cluster: 
10
Residual: 
0.25
Up.MEME Motif1 Matches: 
NA
Up.WEEDER Motif1 Matches: 
NA

PITA_2

Mega Cluster: 
10
Residual: 
0.15
Up.MEME Motif1 Matches: 
V$FOXA2_04_M02749
V$FOXL1_04_M02753
V$FOXK1_03_M02752
V$HNF3B_Q6_M02014
V$FOXO3A_Q1_M01137
V$FOXO1_02_M00474
V$ZFP105_03_M02827
V$FOXJ1_03_M02750
V$HNF3_Q6_01_M01012
V$XFD1_01_M00267
V$FOXO3_01_M00477
V$FOXO4_02_M00476
V$FOXO1_Q5_M01216
Foxa2.1
Foxj3.2
Foxk1.1
Foxl1.1
Zfp105.1
FOXC1_forkhead_DBD_dimeric_13_1
Up.WEEDER Motif1 Matches: 
V$E2F_Q6_M00427
V$E2F1_Q6_01_M00940
V$E2F_Q4_M00426
V$E2F_01_M00024
V$E2F_Q3_M00425
V$E2F1_Q6_M00431
V$E2F4DP1_01_M00738
V$E2F_Q4_02_M00939
V$E2F_Q3_01_M00918
V$E2F_03_M00516
V$E2F_02_M00050
V$E2F_Q4_01_M00919
V$E2F1DP1RB_01_M00740
V$E2F_Q6_01_M00920
V$E2F4DP2_01_M00739
V$E2F1DP1_01_M00736

PITA_196

Mega Cluster: 
10
Residual: 
0.19
Up.MEME Motif1 Matches: 
NA
Up.WEEDER Motif1 Matches: 
NA