TargetScan_131 megaCluster: 11 Residual: 0.13

Summary

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
TargetScan_131 11 0.13 15 0 0.97085 0

Members

Displaying 1 - 29 of 29
26901 differentially expressed in B16F10 1

Details for - - differentially expressed in B16F10 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 26901

Tuberculist Genomic Region

53975 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20

Details for - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 20

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 53975

Tuberculist Genomic Region

68971 TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)

Details for - - TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68971

Tuberculist Genomic Region

70083 meteorin, glial cell differentiation regulator

Details for - - meteorin, glial cell differentiation regulator

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 70083

Tuberculist Genomic Region

74041 RIKEN cDNA 4632434I11 gene

Details for - - RIKEN cDNA 4632434I11 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74041

Tuberculist Genomic Region

75939 RIKEN cDNA 4930579G24 gene

Details for - - RIKEN cDNA 4930579G24 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 75939

Tuberculist Genomic Region

83815 centromere protein Q

Details for - - centromere protein Q

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 83815

Tuberculist Genomic Region

100043772 zinc finger protein 850

Details for mCG_23673 - zinc finger protein 850

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100043772

Tuberculist Genomic Region

107272 phosphoserine aminotransferase 1

Details for - - phosphoserine aminotransferase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 107272

Tuberculist Genomic Region

107995 cell division cycle 20

Details for RP23-145E1.5 - cell division cycle 20

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 107995

Tuberculist Genomic Region

11676 aldolase C, fructose-bisphosphate

Details for - - aldolase C, fructose-bisphosphate

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11676

Tuberculist Genomic Region

19357 RAD21 homolog (S. pombe)

Details for - - RAD21 homolog (S. pombe)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19357

Tuberculist Genomic Region

20833 structure specific recognition protein 1

Details for RP23-232L15.5 - structure specific recognition protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20833

Tuberculist Genomic Region

21335 transforming, acidic coiled-coil containing protein 3

Details for - - transforming, acidic coiled-coil containing protein 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 21335

Tuberculist Genomic Region

218977 discs, large (Drosophila) homolog-associated protein 5

Details for - - discs, large (Drosophila) homolog-associated protein 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 218977

Tuberculist Genomic Region

269224 PAS domain containing serine/threonine kinase

Details for - - PAS domain containing serine/threonine kinase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 269224

Tuberculist Genomic Region

52033 PDZ binding kinase

Details for - - PDZ binding kinase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 52033

Tuberculist Genomic Region

52276 cell division cycle associated 8

Details for RP23-168M5.8 - cell division cycle associated 8

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 52276

Tuberculist Genomic Region

67629 SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)

Details for - - SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67629

Tuberculist Genomic Region

67849 cell division cycle associated 5

Details for - - cell division cycle associated 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67849

Tuberculist Genomic Region

68585 reticulon 4

Details for RP23-176O5.4 - reticulon 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68585

Tuberculist Genomic Region

70235 POC1 centriolar protein homolog A (Chlamydomonas)

Details for - - POC1 centriolar protein homolog A (Chlamydomonas)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 70235

Tuberculist Genomic Region

72183 sorting nexin 6

Details for - - sorting nexin 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72183

Tuberculist Genomic Region

78767 EF-hand calcium binding domain 11

Details for - - EF-hand calcium binding domain 11

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 78767

Tuberculist Genomic Region

16906 lamin B1

Details for - - lamin B1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16906

Tuberculist Genomic Region

20878 aurora kinase A

Details for - - aurora kinase A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20878

Tuberculist Genomic Region

230098 Rho guanine nucleotide exchange factor (GEF) 39

Details for RP23-195K8.7 - Rho guanine nucleotide exchange factor (GEF) 39

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 230098

Tuberculist Genomic Region

27360 adducin 3 (gamma)

Details for - - adducin 3 (gamma)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 27360

Tuberculist Genomic Region

110033 kinesin family member 22

Details for - - kinesin family member 22

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 110033

Tuberculist Genomic Region

TFBS DB TF

TFs percTargets pValue
NA

GO Terms

Displaying 1 - 1 of 1
GO Terms
NA

Upstream MEME Motif

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
1.8e-16 ARAAAAAAAAAA NA 11 TTTWAAATTT NA

Upstream Weeder Motif

Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
1.47 CGTTCG NA 1.45 CGCGTTCG NA

3p UTR Weeder

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.58 CGACGT NA NA 0.64 NGGGTGCG mmu-mir-3093-5p 7mer_m8

3p UTR PITA

miRNAs percTargets pValue
NA

3p UTR TargetScan

miRNAs percTargets pValue
NA

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