TargetScan_186 megaCluster: 1 Residual: 0.25

Summary

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
TargetScan_186 1 0.25 15 0 0.883556 0

Members

Displaying 1 - 52 of 52
100504377 predicted gene, 20199

Details for - - predicted gene, 20199

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100504377

Tuberculist Genomic Region

14086 fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus)

Details for - - fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14086

Tuberculist Genomic Region

16172 interleukin 17 receptor A

Details for - - interleukin 17 receptor A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16172

Tuberculist Genomic Region

20893 basic helix-loop-helix family, member e40

Details for - - basic helix-loop-helix family, member e40

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20893

Tuberculist Genomic Region

235380 Dmx-like 2

Details for RP24-383M20.1 - Dmx-like 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 235380

Tuberculist Genomic Region

68074 RIKEN cDNA A930013F10 gene

Details for - - RIKEN cDNA A930013F10 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68074

Tuberculist Genomic Region

100042807 eukaryotic translation initiation factor 3, subunit J2

Details for - - eukaryotic translation initiation factor 3, subunit J2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100042807

Tuberculist Genomic Region

100503370 predicted gene, 19660

Details for - - predicted gene, 19660

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100503370

Tuberculist Genomic Region

100503422 predicted gene, 19684

Details for - - predicted gene, 19684

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100503422

Tuberculist Genomic Region

100504160 predicted gene, 20094

Details for - - predicted gene, 20094

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100504160

Tuberculist Genomic Region

100504175 predicted gene, 20100

Details for - - predicted gene, 20100

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100504175

Tuberculist Genomic Region

11998 arginine vasopressin

Details for RP23-100C5.5 - arginine vasopressin

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11998

Tuberculist Genomic Region

15370 nuclear receptor subfamily 4, group A, member 1

Details for - - nuclear receptor subfamily 4, group A, member 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15370

Tuberculist Genomic Region

19821 ring finger protein 2

Details for - - ring finger protein 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19821

Tuberculist Genomic Region

231207 cytoplasmic polyadenylation element binding protein 2

Details for - - cytoplasmic polyadenylation element binding protein 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 231207

Tuberculist Genomic Region

319955 excision repair cross-complementing rodent repair deficiency, complementation group 6

Details for - - excision repair cross-complementing rodent repair deficiency, complementation group 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 319955

Tuberculist Genomic Region

320247 RIKEN cDNA C030023E24 gene

Details for - - RIKEN cDNA C030023E24 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 320247

Tuberculist Genomic Region

320878 microtubule associated monooxygenase, calponin and LIM domain containing 2

Details for - - microtubule associated monooxygenase, calponin and LIM domain containing 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 320878

Tuberculist Genomic Region

329562 RIKEN cDNA A530013C23 gene

Details for - - RIKEN cDNA A530013C23 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 329562

Tuberculist Genomic Region

338365 solute carrier family 41, member 2

Details for - - solute carrier family 41, member 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 338365

Tuberculist Genomic Region

382695 immunoglobulin heavy variable 1-56

Details for - - immunoglobulin heavy variable 1-56

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 382695

Tuberculist Genomic Region

52712 zinc finger with KRAB and SCAN domains 6

Details for RP23-215H18.1 - zinc finger with KRAB and SCAN domains 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 52712

Tuberculist Genomic Region

56228 ubiquitin-conjugating enzyme E2J 1

Details for RP23-12I24.8 - ubiquitin-conjugating enzyme E2J 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56228

Tuberculist Genomic Region

664608 reproductive homeobox 4G

Details for - - reproductive homeobox 4G

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 664608

Tuberculist Genomic Region

667281 histocompatibility 60b

Details for - - histocompatibility 60b

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 667281

Tuberculist Genomic Region

67224 mediator complex subunit 29

Details for - - mediator complex subunit 29

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67224

Tuberculist Genomic Region

69597 AFG3(ATPase family gene 3)-like 2 (yeast)

Details for - - AFG3(ATPase family gene 3)-like 2 (yeast)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69597

Tuberculist Genomic Region

74198 deltex 2 homolog (Drosophila)

Details for - - deltex 2 homolog (Drosophila)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74198

Tuberculist Genomic Region

108673 coiled-coil domain containing 86

Details for MNCb-4327 - coiled-coil domain containing 86

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 108673

Tuberculist Genomic Region

170736 parvin, beta

Details for - - parvin, beta

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 170736

Tuberculist Genomic Region

54604 pecanex homolog (Drosophila)

Details for - - pecanex homolog (Drosophila)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 54604

Tuberculist Genomic Region

58185 radical S-adenosyl methionine domain containing 2

Details for - - radical S-adenosyl methionine domain containing 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 58185

Tuberculist Genomic Region

622976 predicted gene 6377

Details for RP23-252O5.3 - predicted gene 6377

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 622976

Tuberculist Genomic Region

99633 latrophilin 2

Details for - - latrophilin 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 99633

Tuberculist Genomic Region

14011 ets variant gene 6 (TEL oncogene)

Details for - - ets variant gene 6 (TEL oncogene)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14011

Tuberculist Genomic Region

15277 hexokinase 2

Details for - - hexokinase 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15277

Tuberculist Genomic Region

16402 integrin alpha 5 (fibronectin receptor alpha)

Details for - - integrin alpha 5 (fibronectin receptor alpha)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16402

Tuberculist Genomic Region

210106 PAP associated domain containing 7

Details for - - PAP associated domain containing 7

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 210106

Tuberculist Genomic Region

214150 argonaute RISC catalytic subunit 3

Details for RP23-113P22.6 - argonaute RISC catalytic subunit 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 214150

Tuberculist Genomic Region

217151 ADP-ribosylation factor-like 5C

Details for RP23-309H19.3 - ADP-ribosylation factor-like 5C

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 217151

Tuberculist Genomic Region

227449 zinc finger, CCHC domain containing 2

Details for - - zinc finger, CCHC domain containing 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 227449

Tuberculist Genomic Region

240396 mex3 homolog C (C. elegans)

Details for - - mex3 homolog C (C. elegans)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 240396

Tuberculist Genomic Region

276950 schlafen 8

Details for RP23-392I13.9 - schlafen 8

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 276950

Tuberculist Genomic Region

338367 myosin ID

Details for - - myosin ID

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 338367

Tuberculist Genomic Region

71436 fibronectin leucine rich transmembrane protein 3

Details for RP23-388J20.1 - fibronectin leucine rich transmembrane protein 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 71436

Tuberculist Genomic Region

228994 YTH domain family 1

Details for RP23-359C15.7 - YTH domain family 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 228994

Tuberculist Genomic Region

70675 valosin containing protein (p97)/p47 complex interacting protein 1

Details for - - valosin containing protein (p97)/p47 complex interacting protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 70675

Tuberculist Genomic Region

100504453 predicted gene, 20236

Details for - - predicted gene, 20236

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100504453

Tuberculist Genomic Region

11787 amyloid beta (A4) precursor protein-binding, family B, member 2

Details for - - amyloid beta (A4) precursor protein-binding, family B, member 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11787

Tuberculist Genomic Region

15957 interferon-induced protein with tetratricopeptide repeats 1

Details for - - interferon-induced protein with tetratricopeptide repeats 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15957

Tuberculist Genomic Region

57783 TNFAIP3 interacting protein 1

Details for - - TNFAIP3 interacting protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 57783

Tuberculist Genomic Region

80910 G protein-coupled receptor 84

Details for - - G protein-coupled receptor 84

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 80910

Tuberculist Genomic Region

TFBS DB TF

TFs percTargets pValue
Evi1_MA0029.1 0.146341 0.0000142

GO Terms

Displaying 1 - 1 of 1
GO Terms
NA

Upstream MEME Motif

Upstream Weeder Motif

Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
1.11 CGCGTC NA 1.13 CGAGNCGG NA

3p UTR Weeder

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.54 CGTTCG NA NA 0.52 CTGTNNAA mmu-mir-196b-3p 7mer_m8

3p UTR PITA

miRNAs percTargets pValue
NA

3p UTR TargetScan

miRNAs percTargets pValue
mmu-miR-5097 0.457143 0.00000998

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