TargetScan_220 megaCluster: 1 Residual: 0.30

Summary

Title	Cluster	Residual	Bicluster Conditions	Residual Permutation P-Value	Var. Exp. First PC	Var. Exp. First PC Perm. P-Value
TargetScan_220	1	0.30	13	0	0.80913	0

Members

Displaying 1 - 43 of 43

TFBS DB TF

TFs	percTargets	pValue
V_T3RBETA_Q6_01_M02119	0.861111	0.000000875

GO Terms

Displaying 1 - 1 of 1

GO Terms
NA

Upstream MEME Motif

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif2 E-Value	Motif2 Consensus	Motif2 Matches
0.92	AAAANAAAAGSA	NA	3000	CCCCCACCCCC	SP1_MA0079.2, V$ZFP281_01_M01597, V$UF1H3BETA_Q6_M01068, V$ZFP281_04_M02831, V$SP1_03_M02281, V$SP1_02_M01303, V$CACBINDINGPROTEIN_Q6_M00720, V$SP4_Q5_M01273, V$EKLF_Q5_M01874, V$SP1_Q2_01_M00933, V$CACD_01_M01113, V$ZNF219_01_M01122, V$CKROX_Q2_M01175, V$KROX_Q6_M00982, V$MAZR_01_M00491, V$MAZ_Q6_01_M02023, V$FKLF_Q5_M01837, V$MAZ_Q6_M00649, V$SP1SP3_Q4_M01219, V$SP1_Q6_M00196, V$ZFP740_03_M02834, V$SP1_Q6_01_M00931, V$SP1_Q4_01_M00932, V$GKLF_02_M01588, V$ZBP89_Q4_M01816, V$CACCCBINDINGFACTOR_Q6_M00721, V$MOVOB_01_M01104, V$EGR1_Q6_M01873, V$KLF7_03_M02773, V$AML2_Q3_M01814, V$GLI3_Q5_01_M01657, V$SP4_03_M02810, Zfp281.2, Zfp740.1, Klf7.1, Sp4.1, Egr1.1, Bcl6b.2, Glis2.1

Upstream Weeder Motif

Motif1 Score	Motif1 Consensus	Motif1 Matches	Motif2 Score	Motif2 Consensus	Motif2 Matches
1.09	GACGCG	NA	1.16	CCGCAGCT

3p UTR Weeder

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif1 Model	Motif2 E-Value	Motif2 Consensus	Motif2 Matches	Motif2 Model
0.65	GTCNCT	NA	NA	0.72	GGTCNCTC	NA	NA

3p UTR PITA

miRNAs	percTargets	pValue
mmu-miR-673-3p	0.5625	0.000015

3p UTR TargetScan

miRNAs	percTargets	pValue
mmu-miR-331-3p	0.46875	0.00000449

21426 sphingomyelin synthase 1 Details for - - sphingomyelin synthase 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 208449 Tuberculist Genomic Region	52398 transcription factor EC Details for - - transcription factor EC GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 21426 Tuberculist Genomic Region
78103 septin 11 Details for - - septin 11 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 52398 Tuberculist Genomic Region	100504215 RIKEN cDNA 8430431K14 gene Details for - - RIKEN cDNA 8430431K14 gene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 78103 Tuberculist Genomic Region
11433 predicted gene, 20115 Details for - - predicted gene, 20115 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 100504215 Tuberculist Genomic Region	12983 integrin alpha 9 Details for - - integrin alpha 9 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 104099 Tuberculist Genomic Region
14191 acid phosphatase 5, tartrate resistant Details for - - acid phosphatase 5, tartrate resistant GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 11433 Tuberculist Genomic Region	16001 colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) Details for - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12983 Tuberculist Genomic Region
16477 Gardner-Rasheed feline sarcoma viral (Fgr) oncogene homolog Details for RP23-125F21.1 - Gardner-Rasheed feline sarcoma viral (Fgr) oncogene homolog GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 14191 Tuberculist Genomic Region	17872 insulin-like growth factor I receptor Details for - - insulin-like growth factor I receptor GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 16001 Tuberculist Genomic Region
19157 jun B proto-oncogene Details for - - jun B proto-oncogene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 16477 Tuberculist Genomic Region	217069 protein phosphatase 1, regulatory (inhibitor) subunit 15A Details for - - protein phosphatase 1, regulatory (inhibitor) subunit 15A GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 17872 Tuberculist Genomic Region
21938 cytohesin 1 Details for RP23-28C17.3 - cytohesin 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 19157 Tuberculist Genomic Region	22337 tripartite motif-containing 25 Details for RP23-176J13.7 - tripartite motif-containing 25 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 217069 Tuberculist Genomic Region
22350 tumor necrosis factor receptor superfamily, member 1b Details for RP23-157J11.1 - tumor necrosis factor receptor superfamily, member 1b GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 21938 Tuberculist Genomic Region	229694 vitamin D receptor Details for - - vitamin D receptor GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 22337 Tuberculist Genomic Region
237887 ezrin Details for - - ezrin GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 22350 Tuberculist Genomic Region	319487 expressed sequence AI504432 Details for - - expressed sequence AI504432 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 229694 Tuberculist Genomic Region
433926 schlafen 10, pseudogene Details for - - schlafen 10, pseudogene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 237887 Tuberculist Genomic Region	56209 RIKEN cDNA A230028O05 gene Details for - - RIKEN cDNA A230028O05 gene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 319487 Tuberculist Genomic Region
56715 leucine rich repeat containing 8 family, member B Details for - - leucine rich repeat containing 8 family, member B GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 433926 Tuberculist Genomic Region	627939 glycerophosphodiester phosphodiesterase 1 Details for - - glycerophosphodiester phosphodiesterase 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 56209 Tuberculist Genomic Region
666730 RAB guanine nucleotide exchange factor (GEF) 1 Details for - - RAB guanine nucleotide exchange factor (GEF) 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 56715 Tuberculist Genomic Region	66878 ribosomal protein L21 pseudogene Details for - - ribosomal protein L21 pseudogene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 627939 Tuberculist Genomic Region
71795 zinc finger, ZZ domain containing 3 pseudogene Details for - - zinc finger, ZZ domain containing 3 pseudogene GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 666730 Tuberculist Genomic Region	72747 RIO kinase 3 Details for - - RIO kinase 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66878 Tuberculist Genomic Region
12702 phosphatidylinositol transfer protein, cytoplasmic 1 Details for RP23-317F9.8 - phosphatidylinositol transfer protein, cytoplasmic 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 71795 Tuberculist Genomic Region	16176 tetratricopeptide repeat domain 39C Details for - - tetratricopeptide repeat domain 39C GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 72747 Tuberculist Genomic Region
18033 suppressor of cytokine signaling 3 Details for RP23-268N22.6 - suppressor of cytokine signaling 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12702 Tuberculist Genomic Region	207728 interleukin 1 beta Details for RP23-384K11.2 - interleukin 1 beta GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 16176 Tuberculist Genomic Region
21817 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 Details for - - nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 18033 Tuberculist Genomic Region	16452 phosphodiesterase 2A, cGMP-stimulated Details for - - phosphodiesterase 2A, cGMP-stimulated GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 207728 Tuberculist Genomic Region
18550 transglutaminase 2, C polypeptide Details for RP23-396G1.2 - transglutaminase 2, C polypeptide GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 21817 Tuberculist Genomic Region	216799 Janus kinase 2 Details for - - Janus kinase 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 16452 Tuberculist Genomic Region
60406 furin (paired basic amino acid cleaving enzyme) Details for - - furin (paired basic amino acid cleaving enzyme) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 18550 Tuberculist Genomic Region	65112 NLR family, pyrin domain containing 3 Details for RP23-210M6.4 - NLR family, pyrin domain containing 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 216799 Tuberculist Genomic Region
17857 sin3 associated polypeptide Details for - - sin3 associated polypeptide GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 60406 Tuberculist Genomic Region	17858 prostate transmembrane protein, androgen induced 1 Details for RP23-412O4.1 - prostate transmembrane protein, androgen induced 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 65112 Tuberculist Genomic Region
68732 myxovirus (influenza virus) resistance 1 Details for - - myxovirus (influenza virus) resistance 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 17857 Tuberculist Genomic Region	74646 myxovirus (influenza virus) resistance 2 Details for - - myxovirus (influenza virus) resistance 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 17858 Tuberculist Genomic Region
12515 leucine rich repeat containing 16A Details for RP23-462P2.7 - leucine rich repeat containing 16A GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 68732 Tuberculist Genomic Region	Details for RP23-169H13.1 - splA/ryanodine receptor domain and SOCS box containing 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 74646 Tuberculist Genomic Region
Details for - - CD69 antigen GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12515 Tuberculist Genomic Region

TargetScan_220 megaCluster: 1 Residual: 0.30

Summary

Members

Details for - - sphingomyelin synthase 1

Details for - - transcription factor EC

Details for - - septin 11

Details for - - RIKEN cDNA 8430431K14 gene

Details for - - predicted gene, 20115

Details for - - integrin alpha 9

Details for - - acid phosphatase 5, tartrate resistant

Details for - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)

Details for RP23-125F21.1 - Gardner-Rasheed feline sarcoma viral (Fgr) oncogene homolog

Details for - - insulin-like growth factor I receptor

Details for - - jun B proto-oncogene

Details for - - protein phosphatase 1, regulatory (inhibitor) subunit 15A

Details for RP23-28C17.3 - cytohesin 1

Details for RP23-176J13.7 - tripartite motif-containing 25

Details for RP23-157J11.1 - tumor necrosis factor receptor superfamily, member 1b

Details for - - vitamin D receptor

Details for - - ezrin

Details for - - expressed sequence AI504432

Details for - - schlafen 10, pseudogene

Details for - - RIKEN cDNA A230028O05 gene

Details for - - leucine rich repeat containing 8 family, member B

Details for - - glycerophosphodiester phosphodiesterase 1

Details for - - RAB guanine nucleotide exchange factor (GEF) 1

Details for - - ribosomal protein L21 pseudogene

Details for - - zinc finger, ZZ domain containing 3 pseudogene

Details for - - RIO kinase 3

Details for RP23-317F9.8 - phosphatidylinositol transfer protein, cytoplasmic 1

Details for - - tetratricopeptide repeat domain 39C

Details for RP23-268N22.6 - suppressor of cytokine signaling 3

Details for RP23-384K11.2 - interleukin 1 beta

Details for - - nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105

Details for - - phosphodiesterase 2A, cGMP-stimulated

Details for RP23-396G1.2 - transglutaminase 2, C polypeptide

Details for - - Janus kinase 2

Details for - - furin (paired basic amino acid cleaving enzyme)

Details for RP23-210M6.4 - NLR family, pyrin domain containing 3

Details for - - sin3 associated polypeptide

Details for RP23-412O4.1 - prostate transmembrane protein, androgen induced 1

Details for - - myxovirus (influenza virus) resistance 1

Details for - - myxovirus (influenza virus) resistance 2

Details for RP23-462P2.7 - leucine rich repeat containing 16A

Details for RP23-169H13.1 - splA/ryanodine receptor domain and SOCS box containing 1

Details for - - CD69 antigen

GO Terms

3p UTR PITA